DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and FAS4

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001320693.1 Gene:FAS4 / 840232 AraportID:AT1G33390 Length:1237 Species:Arabidopsis thaliana


Alignment Length:954 Identity:259/954 - (27%)
Similarity:416/954 - (43%) Gaps:267/954 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKRRIEVGETYG----SKAKKDPEASSSSAAAAAGTVAQILGGFVPNKQPPTMNPLTNTP----Y 58
            |..::||.:|..    :..:.|.|.|              :.|.:.|:......|  ..|    :
plant   179 SSSKLEVDDTVDMIPLTTCRDDDEDS--------------MDGLIENEDVTVQGP--RVPAFVVH 227

  Fly    59 SQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVD-------FAVSK 116
            ..|...:.:.|..||:...:.:.|..::.|..:::.|:||.|||||:||:..:       |:...
plant   228 VSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292

  Fly   117 GRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSD 181
            |..|:  |||||||.::.|:||:.|:.|:||:|||:.:|::......:.:|:||||:||||..:|
plant   293 GIIGI--TQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQND 355

  Fly   182 PMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSD-----------------------LKLVV 223
            .:|.:|.||:|||||||:|.||||:|:|..||:.|.:                       |||::
plant   356 FLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLIL 420

  Fly   224 MSATLDAGKF---QQYFDN-APLMKVPGRTHPVEIFYTPEPE-RDYLEAAIRTVIQIHMCEEIEG 283
            |||||....|   ::.|.| .||::||.|.:||.|.::.:.| .||:..|.:.|:.||. :..:|
plant   421 MSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHK-KLPQG 484

  Fly   284 DILMFLTGQEEIEEACKRIKREIDNL-----------------GS-------EI----------- 313
            .||:|:|||.|::..|:::::....|                 ||       ||           
plant   485 GILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAYVKKKCDDGSFGGVDMKEIAEAFDDDSNNQ 549

  Fly   314 ----------------------------------------------------------------- 313
                                                                             
plant   550 NSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDEDRDWETVDDGFASSFVEEGKLDALRAAFNALA 614

  Fly   314 ------------------------------GELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGR 348
                                          |:|:.:|||:.|.|..|.|:||......      |
plant   615 DKNGSVSAEPAKSIAAENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEE------R 673

  Fly   349 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGK 413
            .|||:||:|||||||.|:.:|:|.|..|.|.|:.:..:||..|..||:|||.||:||||||.||.
plant   674 LVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGH 738

  Fly   414 CFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 478
            |:|||:...|.|..::::.|||::..:..|:|.:|.:.|..:.:|.|..||.|..:..|...|..
plant   739 CYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKA 803

  Fly   479 LAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQ-------HNCSNEIL----SITAMLSVPQC 532
            |.|||.:|.||.||..||.:|:.|:.::||:...|       ::.:|.||    :..|.||:|..
plant   804 LEALDSNGGLTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNP 868

  Fly   533 FV------RPNEAKKAADEAKM------------------RFAHIDGDHLTLLNVYHAFKQSSED 573
            .:      :.||:|.|....|.                  ||::...|.||:....|:|:.|...
plant   869 LIMEFEGEKKNESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENG 933

  Fly   574 PNWCYENFINFRSLKSADNVRQQLARIM----------DRFNLRRTSTEFTSKDYYVN------- 621
            ..:|..|.::.:::.....::.||.|::          |.|:....:.:...|.:.:.       
plant   934 MGFCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKT 998

  Fly   622 ---------IRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHP-STCLDHKPDWVIYNEFVLTT 676
                     :.:|:..|:..:||...|...|......:.|.||. |:.::..|:.::|:|.:||.
plant   999 PLLQNEEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTN 1063

  Fly   677 KNYIRTVTDVKPEW-------LCCLAPQYYDLNNFPQCEAKRQL 713
            :.|:...|.|:|||       ||..:....|...:...|..|.|
plant  1064 RPYMHGATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVL 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 12/55 (22%)
DEXDc 67..255 CDD:214692 85/221 (38%)
DEXDc 91..228 CDD:238005 68/166 (41%)
HELICc 315..408 CDD:197757 43/92 (47%)
HA2 478..561 CDD:214852 33/117 (28%)
OB_NTP_bind 595..698 CDD:285018 29/136 (21%)
FAS4NP_001320693.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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