DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhx15 and EMB3011

DIOPT Version :10

Sequence 1:NP_610269.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_196805.2 Gene:EMB3011 / 831141 AraportID:AT5G13010 Length:1255 Species:Arabidopsis thaliana


Alignment Length:676 Identity:305/676 - (45%)
Similarity:449/676 - (66%) Gaps:32/676 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVD--FAVSKGRKG-VSCT 124
            :.:.::|..||:|..:.:.::::..:|.||:|||||||||||:.|:..:  :.::    | |.||
plant   549 KTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTIN----GIVGCT 609

  Fly   125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQV 189
            |||||||||||:||||||:.:||:::||:|||||.:...|::||||||:||||.:.|..||:|:|
plant   610 QPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRV 674

  Fly   190 ILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEI 254
            :::||||||:|.||:|.|:||:|:.:|.|.||:|.||||:|.||..:|.:.|:..:||||.||.|
plant   675 VVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNI 739

  Fly   255 FYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGS----EIGE 315
            .|:..|..||:|||::..:.||:... .||||:|:|||:|||.||..:|..::.|.|    ||..
plant   740 LYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITN 803

  Fly   316 LKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY 380
            |..:|:||.||.:||.:||:..    .:||  ||.:|:|||||||||:||:.:|||.|:.|.||:
plant   804 LLILPIYSQLPADLQAKIFQKP----EDGA--RKCIVATNIAETSLTVDGIYYVIDTGYGKMKVF 862

  Fly   381 NPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVL 445
            |||:.:::|.|.|||:|::.||:||||||.||.|:|||||.|:.|||..:..|||.|:|||.|||
plant   863 NPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVL 927

  Fly   446 QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIA 510
            .||.|.||:|:.|||||||..|.::.::..|..|.||::.|.|||||..|.||||||.|||||:.
plant   928 LLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLM 992

  Fly   511 SCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPN 575
            ..:.:|.:|:|:|.:|||||..|.||.|..:.:|.|:.:|...:.|||||||||..:|:.....:
plant   993 GERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWKEHDYRGD 1057

  Fly   576 WCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERT 640
            ||.::::..:.|:.|..||.||..|:.:..:...|   ...|:.: :|||:...:|...|.|:..
plant  1058 WCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRS---CGPDWDI-VRKAICSAYFHNSARLKGV 1118

  Fly   641 GYYLTIKDNQNVQLHPSTC---LDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLN 702
            |.|:..:......||||:.   |.:.||:|:|:|.:||||.|::..|.|:|.||..|.|.::.:.
plant  1119 GEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGPMFFSVK 1183

  Fly   703 NFPQCEAKRQLELLQQRLETKQYQKG 728
            :       ....:|:.:.:.|:.:.|
plant  1184 D-------SDTSMLEHKKKQKEEKSG 1202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_610269.1 HrpA 71..>691 CDD:441249 297/629 (47%)
EMB3011NP_196805.2 U2AF_lg 155..>226 CDD:273727
HrpA 558..>1177 CDD:441249 300/633 (47%)
Blue background indicates that the domain is not in the aligned region.

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