DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and AT3G26560

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_189288.1 Gene:AT3G26560 / 822264 AraportID:AT3G26560 Length:1168 Species:Arabidopsis thaliana


Alignment Length:753 Identity:356/753 - (47%)
Similarity:495/753 - (65%) Gaps:63/753 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KAKKDPEASSSSAAAAAGTVAQ------------ILGGFVPNKQPPTMNPLTNT----------- 56
            |..|:||.|.|.|||....:.:            :|.....:...|..:|:..|           
plant   414 KIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG 478

  Fly    57 --------------------PYSQRYQ-NLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSG 100
                                .:.||.: ::.::|.:||:::.:.:.::.:..:|.:|::||||||
plant   479 VGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSG 543

  Fly   101 KTTQIPQWCVDFA-VSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKT 164
            ||||:.|:..:.. .:||:  :.|||||||||||||:||:||...:|||||||:||||||:...|
plant   544 KTTQVTQYLAEAGYTTKGK--IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 606

  Fly   165 LLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLD 229
            ::|||||||||||.:.|..|.||.||:||||||||:.||:|.|:||:::::|.||:|:|.|||||
plant   607 VIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLD 671

  Fly   230 AGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEE 294
            |.||..||.|..:..:||||.||||.||.:||.|||:||:.||:|||:.|. |||||:|||||||
plant   672 AEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEP-EGDILVFLTGQEE 735

  Fly   295 IEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAET 359
            |:.||:.:...:..||..:.||..:|:||.||..:|.|||:|.||..      |||||:|||||.
plant   736 IDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGK------RKVVVATNIAEA 794

  Fly   360 SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFK 424
            ||||||:.:|:|||||||.||||:..:|||:::|||:|||:||:||||||.||||:|||||.|::
plant   795 SLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 859

  Fly   425 NEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLT 489
            |||...:.|||.|.|||...|.:|.:||:||:.|||||||.|:.|:.|:|.|..|.|||::|.||
plant   860 NEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLT 924

  Fly   490 DLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHID 554
            .||..|:||||:|.|:|||:||....||:|||::.||:.....|.||.|.:..||:.:.:|...:
plant   925 KLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPE 989

  Fly   555 GDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYY 619
            |||||||.||.|:|..:....||:||||..|||:.|.:||:||..|||::.|    ...|:...:
plant   990 GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL----DVVTAGKNF 1050

  Fly   620 VNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCL-DHKPDWVIYNEFVLTTKNYIRTV 683
            ..||||:..|||...|..:....|.|:.:||.|.:|||:.| ..:||||||::.|:|||.|:|.|
plant  1051 TKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREV 1115

  Fly   684 TDVKPEWLCCLAPQYYDLNNFPQCEAKRQLELLQQRLE 721
            |.:.|:||..|||:::.::: |...:||:   .|:|:|
plant  1116 TVIDPKWLVELAPRFFKVSD-PTKMSKRK---RQERIE 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 15/83 (18%)
DEXDc 67..255 CDD:214692 103/188 (55%)
DEXDc 91..228 CDD:238005 83/137 (61%)
HELICc 315..408 CDD:197757 56/92 (61%)
HA2 478..561 CDD:214852 40/82 (49%)
OB_NTP_bind 595..698 CDD:285018 44/103 (43%)
AT3G26560NP_189288.1 GH2-like_DHX8 9..76 CDD:409668
S1_DHX8_helicase 214..290 CDD:240189
HrpA 504..1129 CDD:224557 334/637 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

Return to query results.
Submit another query.