DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and dhx38

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_002937626.2 Gene:dhx38 / 734019 XenbaseID:XB-GENE-990308 Length:1212 Species:Xenopus tropicalis


Alignment Length:680 Identity:309/680 - (45%)
Similarity:452/680 - (66%) Gaps:32/680 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 RYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWC-----VDFAVSKGRKG 120
            |.::|.::|..||:|..|.:.:.::..:..:::|||||||||||:.|:.     .|:.:      
 Frog   506 RKKSLMEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGM------ 564

  Fly   121 VSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLD 185
            ::|||||||||||||:||||||.|.|||||||:||||||::.|||:||||||:||||.:.:..||
 Frog   565 IACTQPRRVAAMSVAKRVSEEMQVSLGEEVGYAIRFEDCTSEKTLIKYMTDGILLRECLREADLD 629

  Fly   186 QYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTH 250
            .|..:::||||||:|.||:|.|:|:||:.:||||||:|.|||:||.||..:|.|.|:..:||||.
 Frog   630 HYSAVIMDEAHERSLNTDVLFGLLREVVTRRSDLKLIVTSATMDADKFATFFGNVPIFYIPGRTF 694

  Fly   251 PVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGE 315
            ||:|.::..|:.||:|||::..:|||: ....||||:|:.|||:||....:|...::.|.| ...
 Frog   695 PVDILFSKTPQEDYVEAAVKQALQIHL-SGAAGDILIFMPGQEDIEVTSDQIVERLEELDS-APP 757

  Fly   316 LKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY 380
            |..:|:||.||.:||.:||:.||    :|.  ||.:|:|||||||||:||::||||.|:.|.||:
 Frog   758 LAVLPIYSQLPSDLQAKIFQKAP----DGV--RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVF 816

  Fly   381 NPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVL 445
            ||||.:::|.:.|||:|:|.|||||||||.||:|:||||:.|:|||:...|.|||.|:||..|||
 Frog   817 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQCYRLYTQSAYKNELLHTTVPEIQRTNLSNVVL 881

  Fly   446 QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIA 510
            .||.||:.||:.|.|||||..:.::.::..|..|.|||:.|.||..|.:|.||||||.|:||||.
 Frog   882 LLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIV 946

  Fly   511 SCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPN 575
            ||...||:|||.:.:|||||..|.||...::.:|:.:.:||..:.||||.|||:..:|.::....
 Frog   947 SCDMGCSSEILIVVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVFLQWKNNNYSSG 1011

  Fly   576 WCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERT 640
            ||.::||:.::::....||.||..||..   :|.|......|:.: :||.:...:|.|.|.|:..
 Frog  1012 WCNQHFIHAKAMRKVREVRAQLKDIMVS---QRMSLSSCGSDWDI-VRKCICAAYFHQAARLKGI 1072

  Fly   641 GYYLTIKDNQNVQLHPSTCL---DHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLN 702
            |.|:.::......|||::.|   .:.||:::|:|.|:|||.|::.||.|..|||..|.|.:|.:.
 Frog  1073 GEYVNVRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIK 1137

  Fly   703 NFPQC------EAKRQLELLQQRLETKQYQ 726
            :..:.      .||.::..:::.:...:.|
 Frog  1138 HAGKTRQENRRRAKEEVSAMEEEMMLAEEQ 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 14/40 (35%)
DEXDc 67..255 CDD:214692 104/192 (54%)
DEXDc 91..228 CDD:238005 85/141 (60%)
HELICc 315..408 CDD:197757 51/92 (55%)
HA2 478..561 CDD:214852 42/82 (51%)
OB_NTP_bind 595..698 CDD:285018 36/105 (34%)
dhx38XP_002937626.2 HrpA 483..1131 CDD:224557 304/642 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.