DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and dhx29

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_697933.6 Gene:dhx29 / 553505 ZFINID:ZDB-GENE-130530-606 Length:1377 Species:Danio rerio


Alignment Length:842 Identity:246/842 - (29%)
Similarity:386/842 - (45%) Gaps:190/842 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ETYGSKAKKDPEASSSSAAAAAGTVAQILGGFVPNKQPPTMNPLTNTPYSQRYQNLYKKRIALPV 74
            |...::.:::|:..::|...|        |..|.......:..|..:|.::|   |..:|..|||
Zfish   523 ENLDTQEEQEPQCGAASGGPA--------GLVVEEASRRLLLKLQASPLARR---LLDERKQLPV 576

  Fly    75 FEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSC----TQPRRVAAMSVA 135
            |:::...:..|..|:.:|:.|||||||:|||||:.::..::.|.....|    |||||::|||:|
Zfish   577 FQHREQVLEALRHHRVLVIAGETGSGKSTQIPQFILEELLAAGDTAQPCSVVVTQPRRISAMSLA 641

  Fly   136 QRVSEEMDVKLGEE---------VGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVIL 191
            .|||:|    ||.|         .||.||.|:.|:..|.|.|.|.|:|||:...|..|:....|:
Zfish   642 CRVSQE----LGSEDGPGSMNSLCGYQIRMENRSSEATRLLYCTTGVLLRKLQQDRHLNSLTHII 702

  Fly   192 LDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFY 256
            :||.|||::.:|.|:.:||||:.:|:||:|::||||:|..||..||:..|::.:||||.|||:|:
Zfish   703 VDEVHERSVQSDFLLTILKEVVHKRADLRLILMSATVDCQKFANYFNRCPVVSIPGRTFPVEVFH 767

  Fly   257 TPE-------------------------------------------------------PERDYLE 266
            ..:                                                       ||.|:..
Zfish   768 LEDIVEETGYVLEQDSEYSQKFVEEEEEVNIGITQKGGKTVQHQELIVRDSASGWDLGPELDHFS 832

  Fly   267 AAIRTVIQ------IHM---------------CEEIEGDILMFLTGQEEIEEACKRIKREIDNLG 310
            :..|.::|      |:|               ...::|.:|:||.|...|::....:  ..|...
Zfish   833 SRTRHILQYMNPNKINMDLILDLLAYLDKSPQFNAVDGAVLVFLPGLAHIQQLHDLL--STDKRF 895

  Fly   311 SEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 375
            |.....|.:.|:|:|....|...| ..||...     ||:|:|||||||.:||..||||||.|..
Zfish   896 SSKDRYKLVALHSSLSSQDQSSAF-TVPPAGV-----RKIVLSTNIAETGVTIPDVVFVIDTGRT 954

  Fly   376 KQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNL 440
            |:..|:...::.||:...:|||||.||.|||||.|.|.|||||.:..|::.: |.:.|||||..|
Zfish   955 KENRYHESSQMSSLVEMFVSKASALQRQGRAGRVREGFCFRLYPKFRFESFI-DYSIPEILRVPL 1018

  Fly   441 GTVVLQLKK--LGIDDLVHFDF----MDPPAPETLMRALELLNYLAALDDDGN-LTDLGAVMSEF 498
            ..:.|.:.|  .|..:    ||    :|.|..:.:..|:.||..:.|...|.: ||.||..::..
Zfish  1019 EELCLHIMKCEYGSPE----DFLSRSLDAPQQQAVCNAVSLLRRIGACQQDTHTLTPLGHHLAAL 1079

  Fly   499 PLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNV 563
            |::.::.||||......|...|.:|.|.:|....|..|...|:.|:.||...|..:.||:|:...
Zfish  1080 PVNVKIGKMLIFGAIFGCLEPIATIAAAMSEKSPFATPMSRKEEANLAKSALAVANSDHMTIYKA 1144

  Fly   564 YHAFKQS-----SEDPNWCYENFINFRSLKSADNVRQQLARIMDR-----FNLRRT-----STE- 612
            |..::.|     ..:.|:|..:|:|..:|.:.:.|:|:|.|::::     ..|.||     ||| 
Zfish  1145 YLGWRSSRTEGTRAEMNYCRRHFLNRTALITIEEVKQELMRMVEQAGFVSSKLGRTPRPRPSTET 1209

  Fly   613 -----FTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQ------------NVQLHPST-- 658
                 .:::|..| ::..|..|.:..|..:    .|....|.|            ...:|||:  
Zfish  1210 KAPLSISTQDVCV-VKATLTAGLYDNVGRI----LYSPSLDVQERVVCVVETAQGKAHVHPSSVN 1269

  Fly   659 --CLDHKPDWVIYNEFVLTTKNYIRTVTDVKP----------------------EWLCCLAP 696
              ...|  .|:::.|.|..:|.:::..|.:.|                      .|:|..||
Zfish  1270 RFLQTH--GWMLFQEKVKYSKVFLKDTTLISPLSMLLFGGDIDVQHRERLISLDGWICFQAP 1329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 18/51 (35%)
DEXDc 67..255 CDD:214692 87/200 (44%)
DEXDc 91..228 CDD:238005 66/149 (44%)
HELICc 315..408 CDD:197757 41/92 (45%)
HA2 478..561 CDD:214852 26/83 (31%)
OB_NTP_bind 595..698 CDD:285018 31/156 (20%)
dhx29XP_697933.6 DEXDc 568..766 CDD:214692 87/201 (43%)
DEXDc 591..738 CDD:238005 65/150 (43%)
HELICc 841..996 CDD:238034 57/162 (35%)
HA2 1065..1140 CDD:214852 24/74 (32%)
OB_NTP_bind 1181..1309 CDD:285018 27/134 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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