DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and Dhx38

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_006255639.1 Gene:Dhx38 / 292007 RGDID:1310345 Length:1227 Species:Rattus norvegicus


Alignment Length:736 Identity:314/736 - (42%)
Similarity:468/736 - (63%) Gaps:43/736 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EVGETYGSKAKKDPEASSSSAAAAAGTVAQILGGFVPNKQPPTMNPLTNTPYSQRYQNLYKKRIA 71
            ::|:..|.|.:::|:.:.:..........|.....:..|..      .::.:::: :::.::|..
  Rat   474 KLGDIMGVKKEEEPDKAMTEDGKVDYRTEQKFADHMKEKSE------ASSEFAKK-KSILEQRQY 531

  Fly    72 LPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWC-----VDFAVSKGRKGVSCTQPRRVAA 131
            ||:|..|.:.:.::..:..:::|||||||||||:.|:.     .|:.:      :.|||||||||
  Rat   532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGM------IGCTQPRRVAA 590

  Fly   132 MSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAH 196
            ||||:||||||...|||||||:||||||::..||:||||||:||||::.:..||.|..|::||||
  Rat   591 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAH 655

  Fly   197 ERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPE 261
            ||:|.||:|.|:|:||:.:||||||:|.|||:||.||..:|.|.|:..:||||.||:|.::..|:
  Rat   656 ERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ 720

  Fly   262 RDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLP 326
            .||:|||::..:|:|: ....||||:|:.|||:||....:|...::.| .....|..:|:||.||
  Rat   721 EDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLP 783

  Fly   327 PNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 391
            .:||.:||:.||    :|.  ||.:|:|||||||||:||::||||.|:.|.||:||||.:::|.:
  Rat   784 SDLQAKIFQKAP----DGV--RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQI 842

  Fly   392 SPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLV 456
            .|||:|:|.|||||||||.||:||||||:.|:|||:...|.|||.|:||..|||.||.||:.||:
  Rat   843 YPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLL 907

  Fly   457 HFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEIL 521
            .|.|||||..:.::.::..|..|.|||:.|.||..|.:|.||||||.|:||||.||...||:|||
  Rat   908 QFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEIL 972

  Fly   522 SITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRS 586
            .|.:|||||..|.||...::.:|:.:.:||..:.||||.||||..:|.::....||.::||:.::
  Rat   973 LIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKA 1037

  Fly   587 LKSADNVRQQLARIM--DRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDN 649
            ::....||.||..||  .|.:|....|::..      :||.:...:|.|.|.|:..|.|:.|:..
  Rat  1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTG 1096

  Fly   650 QNVQLHPSTCL---DHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNNFPQC---- 707
            ....|||::.|   .:.||:::|:|.|:|||.|::.||.|..|||..|.|.:|.:....:.    
  Rat  1097 MPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQEN 1161

  Fly   708 --EAKRQLELLQQRLETKQYQ 726
              .||.:...:::.:...:.|
  Rat  1162 RRRAKEEASAMEEEMALAEEQ 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 12/51 (24%)
DEXDc 67..255 CDD:214692 103/192 (54%)
DEXDc 91..228 CDD:238005 84/141 (60%)
HELICc 315..408 CDD:197757 51/92 (55%)
HA2 478..561 CDD:214852 43/82 (52%)
OB_NTP_bind 595..698 CDD:285018 37/107 (35%)
Dhx38XP_006255639.1 DUF3984 <190..>299 CDD:289881
DEXDc 526..713 CDD:214692 103/192 (54%)
DEXDc 551..687 CDD:238005 84/141 (60%)
HELICc 758..861 CDD:197757 55/109 (50%)
HA2 930..1012 CDD:214852 43/81 (53%)
OB_NTP_bind <1063..1146 CDD:285018 30/88 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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