DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and prp43

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_595937.1 Gene:prp43 / 2540057 PomBaseID:SPBC16H5.10c Length:735 Species:Schizosaccharomyces pombe


Alignment Length:701 Identity:446/701 - (63%)
Similarity:541/701 - (77%) Gaps:12/701 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SSSSAAAAAGTVAQILGGFVPNKQPPTMNPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSL 87
            ||......|.||||.    ...::.|. |...:.|:||.|..:.:.|..|||::.:.:|:::...
pombe    31 SSKGLTRRATTVAQA----AKAEEGPN-NFFNDKPFSQNYFKILETRRELPVYQQREEFLKIYHE 90

  Fly    88 HQCIVLVGETGSGKTTQIPQWCV-DFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVG 151
            :|.||.||||||||||||||:.: |.........::|||||||||||||:||::||||.||||||
pombe    91 NQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVG 155

  Fly   152 YSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQR 216
            |:|||||||...||||||||||||||||:|.||.:|..|:||||||||||||||||::|.:..:|
pombe   156 YNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRR 220

  Fly   217 SDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEI 281
            .|||::||||||||.|||:||.:|||:.|||||:||||:||.||||||||||:|||:|||: ||.
pombe   221 PDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHV-EEG 284

  Fly   282 EGDILMFLTGQEEIEEACKRIKREIDNLGSE--IGELKCIPLYSTLPPNLQQRIFEPAPPPNANG 344
            .||||:||||:||||:||::|..|.|:|..|  .|.||..|||.:||||.|||||||.|....:|
pombe   285 PGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSG 349

  Fly   345 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRT 409
             .|||||:|||||||||||||:|:|:||||:|||:|||||||||||||||||||||||:||||||
pombe   350 -YGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRT 413

  Fly   410 RPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 474
            |||||||||||:||:.|:.:.||||||||||.:.||:|||||||||||||:||||||||:|||||
pombe   414 RPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALE 478

  Fly   475 LLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEA 539
            .||||..|||:|:||.||...|||||||.||.|||.|.:..||||:||:||:||||..|||||.|
pombe   479 ELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSA 543

  Fly   540 KKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRF 604
            :|.|||.:.:|.|.|||||||||||||:|......:||:.:|::.|:|.||||||:||.|.|:|.
pombe   544 RKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQ 608

  Fly   605 NLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTG-YYLTIKDNQNVQLHPSTCLDHKPDWVI 668
            .:...||.|..|:||||||:|||.|||||||.....| .|:|:||||.|.||||..|...|:||:
pombe   609 EVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGLSVTPEWVV 673

  Fly   669 YNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNNFP-QCEAKRQLELLQQ 718
            |||||||||::||.||.::||||..|||.||||::|. ..|.|..|:.:.|
pombe   674 YNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVKSALQKVYQ 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 20/51 (39%)
DEXDc 67..255 CDD:214692 122/188 (65%)
DEXDc 91..228 CDD:238005 96/137 (70%)
HELICc 315..408 CDD:197757 71/92 (77%)
HA2 478..561 CDD:214852 53/82 (65%)
OB_NTP_bind 595..698 CDD:285018 61/103 (59%)
prp43NP_595937.1 DEXDc 80..258 CDD:214692 117/177 (66%)
DEXDc 92..232 CDD:238005 97/139 (70%)
HELICc 257..421 CDD:238034 122/165 (74%)
HA2 482..565 CDD:214852 53/82 (65%)
OB_NTP_bind 599..703 CDD:285018 61/103 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 196 1.000 Domainoid score I688
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1040
Inparanoid 1 1.050 845 1.000 Inparanoid score I55
OMA 1 1.010 - - QHG53574
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - oto101066
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R312
SonicParanoid 1 1.000 - - X141
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.