DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhx15 and smgl-2

DIOPT Version :10

Sequence 1:NP_610269.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001294374.1 Gene:smgl-2 / 177135 WormBaseID:WBGene00021365 Length:1089 Species:Caenorhabditis elegans


Alignment Length:589 Identity:207/589 - (35%)
Similarity:327/589 - (55%) Gaps:55/589 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCT 124
            |:.|.|.|.:..||:.|...:.:.||..:|.:::.|:||.||:||:||    :.:..|..||:||
 Worm   132 QKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQ----YLLKAGFTGVACT 192

  Fly   125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQV 189
            ||||:|..::|:||:.|...:.|.||.:.||||...:.||.|.::|:|:|||:...|.:|::|.|
 Worm   193 QPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNV 257

  Fly   190 ILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEI 254
            |:|||.|||.|.:|:|:|:|:::..:|.||||::||||::...|:.||:.||:::||||..|:::
 Worm   258 IILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDV 322

  Fly   255 FYTP---------------EPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKR 304
            .:.|               :|| .||:  |..:|.........||.|:||.|..||....:.:|.
 Worm   323 RWHPIKQFIDQSDKKTHKIDPE-PYLK--ILELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKN 384

  Fly   305 --EIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIG-RKVVVSTNIAETSLTIDGV 366
              |:.|     |.: .:.|:|||....|.::|:.||       :| ||.::|||:||||:||||:
 Worm   385 YAELTN-----GWI-ILMLHSTLSVEEQDKVFDQAP-------VGIRKCILSTNVAETSVTIDGI 436

  Fly   367 VFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNT 431
            .||||.|......:.|....:.|....:|||||.||.||||||.||.|:|||:::.|: :|.|.|
 Worm   437 RFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFE-KMDDFT 500

  Fly   432 YPEILRSNLGTVVLQL--KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDG----NLTD 490
            ..||.|.:|..:.|::  ..||:|... |.|::.|:.:.|...||:|.:...|..|.    .||.
 Worm   501 VSEINRVSLQEMALKMISLNLGLDPRT-FPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTA 564

  Fly   491 LGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDG 555
            ||.::|:.|::..:||||:..|..:....:|::.|.|||...|...:..:....|.:.......|
 Worm   565 LGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPLG 629

  Fly   556 DHLTLLNVYH------AFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRFNL-RRTSTEF 613
            |..||::::.      ||:.::.  .|..||.|:...|.....:|.|..:|::...| .:.|...
 Worm   630 DPFTLISIFREWVLQKAFEGTAR--RWTMENGIDEHRLYEISKLRAQYRQILEDAGLVEKASAAE 692

  Fly   614 TSKD 617
            |.:|
 Worm   693 TGED 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_610269.1 HrpA 71..>691 CDD:441249 203/578 (35%)
smgl-2NP_001294374.1 HrpA 143..>694 CDD:441249 201/574 (35%)
OB_NTP_bind 788..888 CDD:400182
Blue background indicates that the domain is not in the aligned region.

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