DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhx15 and Dhx29

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_002729053.2 Gene:Dhx29 / 100362324 RGDID:2318361 Length:1366 Species:Rattus norvegicus


Alignment Length:804 Identity:240/804 - (29%)
Similarity:387/804 - (48%) Gaps:157/804 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SKAKKDPEAS--------SSSAAAAAGTVAQILGGFVPNKQPPTMNPLTNTPYSQRYQNLYKKRI 70
            ::..:|||.|        ..||.:...|.|:.|        .|..|.......:.:||.|.|:|.
  Rat   514 TETAEDPEESWENLVSDEDLSALSLEPTGAEDL--------EPVRNLFRRLQSTPKYQRLLKERQ 570

  Fly    71 ALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSK---GRK-GVSCTQPRRVAA 131
            .||||:::|..:..|..|:.:|:.|||||||:||:|.:.::..:..   .|| .:.||||||::|
  Rat   571 QLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRRISA 635

  Fly   132 MSVAQRVSEEMDVKLG-----EEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVIL 191
            :|:|.||.||:..:.|     ...||.||.|..::..|.|.|.|.|:|||:...|.:|.....::
  Rat   636 VSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVI 700

  Fly   192 LDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFY 256
            :||.|||::.:|.|:.:|||::::||||.|::||||:|:.||..||.:.|::::.||::|||:|:
  Rat   701 VDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 765

  Fly   257 -----------------------------------------------------TPE--------- 259
                                                                 :||         
  Rat   766 LEDIVEETGFILEKDSEYCQKFLEEEEEITINVTSKAGGIKKYQECIPVQSGASPELSPFYQKYS 830

  Fly   260 -----------PERDYLEAAIRTVIQIHMCEE---IEGDILMFLTGQEEIEEACKRIKREIDNLG 310
                       |.:..|:..:..::.:....:   |||.:|:||.|...|::....:..: ....
  Rat   831 SRTQYAVLYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSND-RRFY 894

  Fly   311 SEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 375
            ||..:|  |.|:|.|....|...| ..|||..     ||:|::||||||.:||..||||||.|..
  Rat   895 SERYQL--IALHSVLSTQDQAAAF-MLPPPGV-----RKIVLATNIAETGITIPDVVFVIDTGRT 951

  Fly   376 KQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNL 440
            |:..|:...::.||:.:.:|||||.||.|||||.|.|.||||||.:.|:..: :.:.|||||..|
  Rat   952 KENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFL-EYSVPEILRVPL 1015

  Fly   441 GTVVLQLKK--LGIDDLVHFDF----MDPPAPETLMRALELLNYLAALD-DDGNLTDLGAVMSEF 498
            ..:.|.:.|  ||..:    ||    :|||.|:.:..|:.||..:.|.: .:..||.||..::..
  Rat  1016 EELCLHIMKCDLGSPE----DFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAAL 1076

  Fly   499 PLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNV 563
            |::.::.||||......|...:.::.|:::....|:.|...|..||.||...|..|.||||:.|.
  Rat  1077 PVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNA 1141

  Fly   564 YHAFKQSSEDP------NWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSK------ 616
            |..:|::.::.      ::|..||:|..||.:.::|:|:|.:::..... .:||.:..|      
  Rat  1142 YLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGF-SSSTSWEGKKGPQAL 1205

  Fly   617 ---DYYVNIRKALVQGFFMQVAHL---------ERTGYYLTIKDNQNVQLHPSTCLDHKPD---- 665
               |..: ::..|..|.:..|..:         |:....:.....: .|:|||:.   ..|    
  Rat  1206 SFQDIAL-LKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGK-AQVHPSSV---NRDLQTY 1265

  Fly   666 -WVIYNEFVLTTKNYIRTVTDVKP 688
             |::|.|.|...:.|:|..|.:.|
  Rat  1266 GWLLYQEKVRYARVYLRETTLITP 1289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 20/51 (39%)
DEXDc 67..255 CDD:214692 81/196 (41%)
DEXDc 91..228 CDD:238005 60/145 (41%)
HELICc 315..408 CDD:197757 42/92 (46%)
HA2 478..561 CDD:214852 25/83 (30%)
OB_NTP_bind 595..698 CDD:285018 23/117 (20%)
Dhx29XP_002729053.2 HrpA 531..1314 CDD:224557 236/787 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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