DRSC/TRiP Functional Genomics Resources

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Protein Alignment cos and KIP2

DIOPT Version :10

Sequence 1:NP_477092.1 Gene:cos / 35653 FlyBaseID:FBgn0000352 Length:1201 Species:Drosophila melanogaster
Sequence 2:NP_015170.1 Gene:KIP2 / 855948 SGDID:S000006076 Length:706 Species:Saccharomyces cerevisiae


Alignment Length:616 Identity:132/616 - (21%)
Similarity:222/616 - (36%) Gaps:210/616 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 HALPSSSSQEQVYHQTVFPLITLFLEGFDASVVTYGQRGQGKSYTLYGNVQDPTLTDSTEGVVQL 204
            |...|..:..:||.:|..|:|...|.||:|::..||..|.||::|:.||.|:       .|::.|
Yeast   167 HVFASHCTNLEVYERTSKPMIDKLLMGFNATIFAYGMTGSGKTFTMSGNEQE-------LGLIPL 224

  Fly   205 CVRDIFSHI---SLHPERTYAINVGFVEICGGDVCDLL--------------------------- 239
            .|..:|::|   |::.::.:.:.:.::||....:.|||                           
Yeast   225 SVSYLFTNIMEQSMNGDKKFDVIISYLEIYNERIYDLLESGLEESGSRISTPSRLYMSKSNSNGL 289

  Fly   240 -----------------GMGNIHCTNVDAVFHWLQVGLSAR---------QSLPAHTLFTLTLEQ 278
                             |:....|.:.:.:..|:.||..:|         :|..:|.:..:.|..
Yeast   290 GVELKIRDDSQYGVKVIGLTERRCESSEELLRWIAVGDKSRKIGETDYNARSSRSHAIVLIRLTS 354

  Fly   279 QWVSKEGLLQHRLSTASFSDLCGTERCGDQPPGRP----LDAGLCMLEQVISTLT-DPGLMYGVN 338
            ..| |.|  ..|.||.|..||.|:||...|...|.    ::..|..|..|||.|: |.....|.|
Yeast   355 TNV-KNG--TSRSSTLSLCDLAGSERATGQQERRKEGSFINKSLLALGTVISKLSADKMNSVGSN 416

  Fly   339 -------------GN-----------IPYGQTTLTTLLKDSFGGRAQTLVILCVSPLEEHLPETL 379
                         ||           |||..:.||.||:.:..|.:....|..|....:...||:
Yeast   417 IPSPSASGSSSSSGNATNNGTSPSNHIPYRDSKLTRLLQPALSGDSIVTTICTVDTRNDAAAETM 481

  Fly   380 GNLQFAFKVQCV-----RNFVIMNTYSD---DNTM------IVQPAEPVPE--SNSSAG-PLSQA 427
            ..|:||.:.:.|     :..:|.|..:|   |.|:      :.:....:.|  :.|:.| ||:::
Yeast   482 NTLRFASRAKNVALHVSKKSIISNGNNDGDKDRTIELLRRQLEEQRRMISELKNRSNIGEPLTKS 546

  Fly   428 -------------GPGD-NFGLQFAASQWSKL-VTNAEGLFSK----LIDSKLITEVEKEQIEEW 473
                         ..|| |..|..|.::..|. :.|.|.|..|    |.||:::..||....|..
Yeast   547 SNESTYKDIKATGNDGDPNLALMRAENRVLKYKLENCEKLLDKDVVDLQDSEIMEIVEMLPFEVG 611

  Fly   474 LFLKQECEECLSSTEAMRQQKQLVPILEAEEPEDVNSEAANSESPNSDNENDTDNESHRPDLDDK 538
            ..|:.:.:...|.....|:..|                                      .|:||
Yeast   612 TLLETKFQGLESQIRQYRKYTQ--------------------------------------KLEDK 638

  Fly   539 IESLMEEFR--------DKTDALILEKHAEYLSKHPKAVMQSQDREIEAQPPEENGDDRKVSIGS 595
            |.:|.:...        |.|:.:.|:|           :::.:|:.|||....:.         .
Yeast   639 IMALEKSGHTAMSLTGCDGTEVIELQK-----------MLERKDKMIEALQSAKR---------L 683

  Fly   596 RRRSVQPGASLSTAELAMLNRVASQQPPPPI 626
            |.|:::|          ::|   :||.|.|:
Yeast   684 RDRALKP----------LIN---TQQSPHPV 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cosNP_477092.1 Kinesin 140..389 CDD:459720 80/333 (24%)
SMC_N 660..>999 CDD:481474
KIP2NP_015170.1 KISc_CENP_E 102..493 CDD:276825 80/335 (24%)
SMC_prok_B <445..>698 CDD:274008 63/323 (20%)
Blue background indicates that the domain is not in the aligned region.

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