DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cos and MLP1

DIOPT Version :9

Sequence 1:NP_001260765.1 Gene:cos / 35653 FlyBaseID:FBgn0000352 Length:1201 Species:Drosophila melanogaster
Sequence 2:NP_013021.1 Gene:MLP1 / 853970 SGDID:S000001803 Length:1875 Species:Saccharomyces cerevisiae


Alignment Length:882 Identity:191/882 - (21%)
Similarity:319/882 - (36%) Gaps:251/882 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 NAEGLFSKLID-SKLITEVE------KEQIEEWLFLKQECEECLSSTEA--MRQQKQLVPILEAE 503
            |.|....|..| ||.|:|:.      |.|::.....:.:.|..|...|.  ..|::.|:..|:..
Yeast  1042 NYEQELQKHADVSKTISELREQLHTYKGQVKTLNLSRDQLENALKENEKSWSSQKESLLEQLDLS 1106

  Fly   504 EP--EDVNSE------------AANSESPNSDNENDTDN-----ESHRPDLDDKIE--------- 540
            ..  ||::|:            ||:.|..||.|....:|     ...|..||.|:.         
Yeast  1107 NSRIEDLSSQNKLLYDQIQIYTAADKEVNNSTNGPGLNNILITLRRERDILDTKVTVAERDAKML 1171

  Fly   541 ----SLM----EEFRDKTDALILEK--HAEYLSKHPKAVMQS-------QDREIEAQPPEENGDD 588
                |||    ::.|.|.|...:||  |:..:.:|.. :|:.       ::..|..:...||.::
Yeast  1172 RQKISLMDVELQDARTKLDNSRVEKENHSSIIQQHDD-IMEKLNQLNLLRESNITLRNELENNNN 1235

  Fly   589 RKVSIGSRRRSVQPGASLSTAELAMLNRVASQQPPPPIDPESVVDPLESSSGEGIRQAALA---- 649
            :|..:.|              ||..|     :|...||  ||.:..|:.|..|..::..||    
Yeast  1236 KKKELQS--------------ELDKL-----KQNVAPI--ESELTALKYSMQEKEQELKLAKEEV 1279

  Fly   650 --------------AAAATAPIEQLQKKLRKLVAEIEGKQRQLREIEETIQVKQNIIAELVKNSD 700
                          ...:::..|:|:.::..|..|:|.|:||..|.||             |.:.
Yeast  1280 HRWKKRSQDILEKHEQLSSSDYEKLESEIENLKEELENKERQGAEAEE-------------KFNR 1331

  Fly   701 TRSHAKQRFHKKRAKLEAECDKAKKQLGKALVQGRDQSEIERWTTIIGHLERRLEDLSSMKHIAG 765
            .|..|::|.  |.:||..  |...:|:...    ||...:  ....:.....|:|:|.:.|...|
Yeast  1332 LRRQAQERL--KTSKLSQ--DSLTEQVNSL----RDAKNV--LENSLSEANARIEELQNAKVAQG 1386

  Fly   766 ESG-QKVKKLQQSVGESRKQADDLQKKLRKECKLRCQMEAELAKLRESRETGKELVKAQGSPEQQ 829
            .:. :.::|||:   ::.|.:.:||.||.:.   ....|:.:..|.|...|.||.::.|...:| 
Yeast  1387 NNQLEAIRKLQE---DAEKASRELQAKLEES---TTSYESTINGLNEEITTLKEEIEKQRQIQQ- 1444

  Fly   830 GRQLKAVQARITH-LNHILREKSDNLEE-------QPGPEQQETLRHEIRNLRGTRDLLLEERCH 886
              ||:|..|...: |::|:.....:.||       :...|..|.:......|....::.:||   
Yeast  1445 --QLQATSANEQNDLSNIVESMKKSFEEDKIKFIKEKTQEVNEKILEAQERLNQPSNINMEE--- 1504

  Fly   887 LDRKLKRDKVLTQKEERKLLECDEAI---------EAIDAAIEFKNEMITGHRSIDTSDRIQ--R 940
              .|.|.:....|:..:|:.|.:||:         |.|:..||.|.|.:.........:||:  .
Yeast  1505 --IKKKWESEHEQEVSQKIREAEEALKKRIRLPTEEKINKIIERKKEELEKEFEEKVEERIKSME 1567

  Fly   941 EKGE--QMLMARLNRLSTEEMRTLLYKYFTKVIDLRDSSRKLELQLVQLERERDAWEWKERVLSN 1003
            :.||  .:|..:|.....|:.:.|..:|          ::||:.:|..:.......: .||....
Yeast  1568 QSGEIDVVLRKQLEAKVQEKQKELENEY----------NKKLQEELKDVPHSSHISD-DERDKLR 1621

  Fly  1004 AVRQARLEGERNAVLL----------QRQHEMKLTLMLRHMAE------ETSASSASYGERALAP 1052
            |..::||..|.|..|.          ::|..||.||:.|.:|:      ||..|:.|        
Yeast  1622 AEIESRLREEFNNELQAIKKKSFDEGKQQAMMKTTLLERKLAKMESQLSETKQSAES-------- 1678

  Fly  1053 ACVAPPVQASSDFDYDHFYKGGGNPSKALIKAPK-----------PMPTGSALDKYKDKEQRSGR 1106
                ||             |...|....|:..|:           |:.:|..|.|...|....|.
Yeast  1679 ----PP-------------KSVNNVQNPLLGLPRKIEENSNSPFNPLLSGEKLLKLNSKSSSGGF 1726

  Fly  1107 NIFA----KFHVLT---RYASAAAAGSSGSTAEESTALIESTTTATATTTSTTTTGAVGKVKDKA 1164
            |.|.    ..|:..   :..|.|......:..|.|..:..|....::::|.:|.|      .|:.
Yeast  1727 NPFTSPSPNKHLQNDNDKRESLANKTDPPTHLEPSFNIPASRGLISSSSTLSTDT------NDEE 1785

  Fly  1165 LVSFRPEQLKRLMPAPTATKVTRQKNKIIIQDASRRN 1201
            |.|..|.|                      :|:|.||
Yeast  1786 LTSNNPAQ----------------------KDSSNRN 1800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cosNP_001260765.1 Motor_domain 132..389 CDD:277568
SPEC 657..856 CDD:295325 49/200 (25%)
MLP1NP_013021.1 Smc <68..320 CDD:224117
Smc 214..1087 CDD:224117 12/44 (27%)
SMC_prok_B 753..>1496 CDD:274008 113/507 (22%)
TPR_MLP1_2 999..1125 CDD:400329 19/82 (23%)
pneumo_PspA 1374..>1673 CDD:411490 75/323 (23%)
PTZ00108 <1526..1838 CDD:240271 71/339 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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