DRSC/TRiP Functional Genomics Resources

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Protein Alignment cos and AT4G39050

DIOPT Version :9

Sequence 1:NP_001260765.1 Gene:cos / 35653 FlyBaseID:FBgn0000352 Length:1201 Species:Drosophila melanogaster
Sequence 2:NP_195616.2 Gene:AT4G39050 / 830060 AraportID:AT4G39050 Length:1055 Species:Arabidopsis thaliana


Alignment Length:1182 Identity:238/1182 - (20%)
Similarity:410/1182 - (34%) Gaps:356/1182 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RSFGPTEPKKDAQAVDEGADSKDSEAQVPAAEKDNPSISETDPNGNAEQDSAADSKTIPDANGND 86
            ||..|:....|:..:..|:....|....|:.|.....:.:|.   ::|:||.:.:......:..:
plant    51 RSMTPSRTFSDSGLIGSGSFGIGSPVPYPSEELLGDPMDDTI---SSERDSISVTVRFRPLSDRE 112

  Fly    87 SGQKD----YPDSAYCV--QAIPISASALGLPSALPGGDPMDSIAAGLIQVGPHTVPVTHALPSS 145
            ..:.|    |||....|  :..|::|.|            .|.:      .||....:       
plant   113 YQRGDEVAWYPDGDTLVRHEYNPLTAYA------------FDKV------FGPQATTI------- 152

  Fly   146 SSQEQVYHQTVFPLITLFLEGFDASVVTYGQRGQGKSYTLYGNVQDPTLTDSTEGVVQLCVRDIF 210
                .||.....|::...:||.:.:|..||....||::|::|:.:.|       |::.|.::|:|
plant   153 ----DVYDVAARPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQESP-------GIIPLAIKDVF 206

  Fly   211 SHISLHPERTYAINVGFVEICGGDVCDLL---GMGNIHC------TNVDAV-----------FHW 255
            |.|...|.|.:.:.|.::||....:.|||   |. |:..      |.|:.:           ..:
plant   207 SIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQ-NLRVREDSQGTYVEGIKEEVVLSPGHALSF 270

  Fly   256 LQVG-------------LSARQSLPAHTLFTLTLEQQWVSKE--GLLQHRLSTASFSDLCG---- 301
            :..|             ||:|    :||:|||.:|......|  |::   .|..:..||.|    
plant   271 IAAGEEHRHVGSNNFNLLSSR----SHTIFTLMVESSATGDEYDGVI---FSQLNLIDLAGSESS 328

  Fly   302 -TERCG-DQPPGRPLDAGLCMLEQVISTLTDPGLMYGVNGNIPYGQTTLTTLLKDSFGGRAQTLV 364
             ||..| .:..|..::..|..|..||..|::     |...:|||..:.||.||:.|..|.....:
plant   329 KTETTGLRRKEGSYINKSLLTLGTVIGKLSE-----GKATHIPYRDSKLTRLLQSSLSGHGHVSL 388

  Fly   365 ILCVSPLEEHLPETLGNLQFAFKVQCVRNFVIMNTYSDDNTMIVQPAEPVPESNSSAGPLSQAGP 429
            |..::|......||...|:||.:.:.:..:...|...|:.::|.:....:.........|.:   
plant   389 ICTITPASSSSEETHNTLKFASRAKSIEIYASRNQIIDEKSLIKKYQREISTLKLELDQLRR--- 450

  Fly   430 GDNFGLQFAASQWSKLVTNAEGLFSKLIDSKLITEVEKEQIEEWLFLKQECEECLSSTEAMRQQK 494
                |:....|.                             ||.:.|||:.||     ..::.|.
plant   451 ----GMLVGVSH-----------------------------EELMSLKQQLEE-----GQVKMQS 477

  Fly   495 QLVPILEAEEPEDVNSE--------------AANSESPNSDNENDTDNESHRPDLDDKIESLMEE 545
            :|      ||.|:..:.              :..:..|....:..|...|.....|||.:||:.|
plant   478 RL------EEEEEAKAALMSRIQKLTKLILVSTKNSIPGYSGDIPTHQRSLSAGKDDKFDSLLLE 536

  Fly   546 FRD-----KTDALILEKHAEYLSKHPKAVMQSQDREIEAQPPEENGDDRKVSIGSRRRSVQPGAS 605
            ..:     .|.||:.|....:  .|.::..:..|         ||               .|||.
plant   537 SDNLGSPSSTLALLSEGSLGF--NHRRSSSKLND---------EN---------------SPGAE 575

  Fly   606 LSTAELAMLNRVASQQPPPPIDPESVVDPLESSSGEGIRQAALAAAAATAPIEQL---------- 660
            .:...:.          |..||  .:|:.::..:||        .|.:|:.:::|          
plant   576 FTQGVMT----------PDEID--LLVEQVKMLAGE--------IAFSTSTLKRLVDQSVNDPEN 620

  Fly   661 -QKKLRKLVAEIEGKQRQLREIEETI--QVKQNII-AELVKNSDTRSHAKQRFHKKRAKLEAE-C 720
             |.:::.|..||..||||:|.:|:.|  ..:.:|. |.||:..........:.::|..:||.: .
plant   621 SQTQIQNLEREIHEKQRQMRGLEQLIIESGEASIANASLVEMQQKVMSLMTQCNEKSFELEIKSA 685

  Fly   721 DKA--KKQLGKALVQGRDQSEIERWTTIIGHLERRLEDLSSMKHIAGESGQKVKKLQQSVGESRK 783
            |..  ::||.:...:.::..|      .:..||:||..:||.|.....|.:.|         |.:
plant   686 DNCILQEQLQEKCTENKELHE------KVNLLEQRLNAVSSEKSSPSCSNKAV---------SGE 735

  Fly   784 QADDLQKKLRKECKLRCQMEAELAKLRESRETGKELVKAQGSPEQQGRQLKAVQARITHLNHILR 848
            .||:|:||::                               |.|.:..:||....:|...|..||
plant   736 YADELKKKIQ-------------------------------SQEIENEELKLEHVQIVEENSGLR 769

  Fly   849 EKSDNLEEQP--GPEQQETLRHEIRNLRGTRDLLLEERCHLDRKLKRDKVLTQKE------ERKL 905
            .::..|.|:.  ..|.......|::||......|..:...|:::|...:.|.|..      .||.
plant   770 VQNQKLAEEASYAKELASAAAVELKNLASEVTKLSLQNTKLEKELAAARDLAQTRNPMNGVNRKY 834

  Fly   906 LECDEAIEAIDAAIEFKNEMITGHRS---------IDTSD-------RIQREKGEQMLMARLNRL 954
                     .|.|...:...|:..||         :|..|       |.|||...:..:|....:
plant   835 ---------NDGARSGRKGRISSSRSSGDEFDAWNLDPEDLKMELQVRKQREVALESALAEKEFI 890

  Fly   955 STEEMRTLLYKYFTKVIDLRDSSRKLELQLV--------------------------QLERERDA 993
            ..|        |..|..:.:.....||..|.                          :||:.:..
plant   891 EDE--------YRKKAEEAKRREEALENDLANMWVLVAKLKKDNGALPEPNGTDPGRELEKSQSH 947

  Fly   994 WEWKERVLSNAVRQARLEGERNAVLLQRQHE--------MKLTLMLRHMAEETSASSASYGERA- 1049
            ...|||.:|:|.||..:      |::.:..|        .:|...::.|.|:...|.|:....: 
plant   948 AVLKERQVSSAPRQPEV------VVVAKTEETPKEEPLVARLKARMQEMKEKEMKSQANGDANSH 1006

  Fly  1050 LAPACVAPPVQA 1061
            :...|...|..|
plant  1007 ICKVCFESPTAA 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cosNP_001260765.1 Motor_domain 132..389 CDD:277568 75/297 (25%)
SPEC 657..856 CDD:295325 47/215 (22%)
AT4G39050NP_195616.2 KISc_CENP_E 98..415 CDD:276825 85/365 (23%)
SMC_prok_B 624..>914 CDD:274008 75/352 (21%)
zf-C3HC4_3 1004..1049 CDD:404755 3/15 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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