DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam1 and IGDCC4

DIOPT Version :10

Sequence 1:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster
Sequence 2:XP_047288863.1 Gene:IGDCC4 / 57722 HGNCID:13770 Length:1319 Species:Homo sapiens


Alignment Length:1702 Identity:329/1702 - (19%)
Similarity:525/1702 - (30%) Gaps:629/1702 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 VRNDQESAEASAELKLGGRFDPPVIRQAFQEETME-------------PGPSVFLKC----VAGG 458
            |.....|.:.|||...|....|       ||.|:|             |..:..|.|    .|.|
Human    21 VSRASSSPQPSAEWVRGELLLP-------QETTVELSCGVGPLQVILGPEQAAVLNCSLGAAAAG 78

  Fly   459 NPTPEISWELDGKKIANNDRYQ--------VGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSK 515
            .|| .::|..||..:..:|...        :.|.:..||...|......|..   |.|.|:|...
Human    79 PPT-RVTWSKDGDTLLEHDHLHLLPNGSLWLSQPLAPNGSDESVPEAVGVIE---GNYSCLAHGP 139

  Fly   516 VGV-AEHSAKLNVYGL-PYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKV 578
            :|| |..:|.:.:..| .:....|.:.:....|....|.:.|.|...|.||:|...||...:..|
Human   140 LGVLASQTAVVKLATLADFSLHPESQTVEENGTARFECHIEGLPAPIITWEKDQVTLPEEPRLIV 204

  Fly   579 FPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAYEDLINMGDSIDLFC 643
            .|||.|.|.:|: .||...|.|||.|    |||..             |:.|.|::         
Human   205 LPNGVLQILDVQ-ESDAGPYRCVATN----SARQH-------------FSQEALLS--------- 242

  Fly   644 QIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRISEKTSMISIPSASPAHTGRDTCIASNKAG 708
                                               ::.:.|:.|.       .|:|..|.:....
Human   243 -----------------------------------VAHRGSLAST-------RGQDVVIVAAPEN 265

  Fly   709 TTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSD 773
            ||..|                      |....:||.|...|.|.|:|.:..||:..:....:..:
Human   266 TTVVS----------------------GQSVVMECVASADPTPFVSWVRQDGDSRAQRVPARGGN 308

  Fly   774 NIRVEEG-------------------------------------------------TLHVDNIQK 789
            .||..:|                                                 .|.:.|.|.
Human   309 EIRTRDGCVCFIRVQSVPEVRRLKGRAVPSVPSSASPSPSPDGKPISTDVIVLGRTNLLIANAQP 373

  Fly   790 TNEGYYLCEA-------INGIGSGLSAVIMISVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEKP 847
            .:.|.|:|.|       .....:.|..:...::...||...:.|..|||      ..|.|.||..
Human   374 WHSGVYVCRANKPRTRDFATAAAELRVLAAPAITQAPEALSRTRASTAR------FVCRASGEPR 432

  Fly   848 IGILWNMNNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNAFG--SDDASI 910
            ..:.|..|...|.|..      |.::...|  .||.|.:....|:..:.|||.|:.|  ...||:
Human   433 PALRWLHNGAPLRPNG------RVKVQGGG--GSLVITQIGLQDAGYYQCVAENSAGMACAAASL 489

  Fly   911 NMIVQE-VPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASWSEIDRVIVPGHT 974
            .::|:| :|..|..:.....|..:|.::|.:|...:..:..:.:.::::|...:...:..|...|
Human   490 AVVVREGLPSAPTRVTATPLSSSAVLVAWERPEMHSEQIIGFSLHYQKARGMDNVEYQFAVNNDT 554

  Fly   975 TEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKP 1039
            ||.||:.|.|.|.|...:||.:.:|.|::|....:.|.::.||..|| :.:...|.:.:||.|.|
Human   555 TELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQ-LSLSSPNPSDIRVAWLP 618

  Fly  1040 PPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIG 1104
            .|.:..||:::.|.:.|.|...:..:..|.      .|.|..|.|.:|:....|.|.|.|....|
Human   619 LPPSLSNGQVVKYKIEYGLGKEDQIFSTEV------RGNETQLMLNSLQPNKVYRVRISAGTAAG 677

  Fly  1105 AGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYD 1169
            .             |.|||                  |:                          
Human   678 F-------------GAPSQ------------------WM-------------------------- 685

  Fly  1170 ETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMG 1234
                |:                                 |:..:|.|:.  ||.||.::|.... 
Human   686 ----HH---------------------------------RTPSMHNQSH--VPFAPAELKVQAK- 710

  Fly  1235 NAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQ----------------MSFEAT 1283
            ..:::|||:||..|.. |:.|.:|.:..|||.|....::|..:                ..:|.|
Human   711 MESLVVSWQPPPHPTQ-ISGYKLYWREVGAEEEANGDRLPGGRGDQAWDVGPVRLKKKVKQYELT 774

  Fly  1284 ELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASF---DDTFTATFKEDAKMPCLAVG 1345
            :|...:.||                           .|:.:|   :|.:.|.:|...:.      
Human   775 QLVPGRLYE---------------------------VKLVAFNKHEDGYAAVWKGKTEK------ 806

  Fly  1346 APQPEITWKIKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPP 1410
            ||.|::.                                                    |...||
Human   807 APAPDMP----------------------------------------------------IQRGPP 819

  Fly  1411 QSP-HVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVS-VDSQKHNIEGLLCG 1473
            ..| ||...:.::.::.::.|..:..|..:..||:.:.|    |.....| |.....:.|.:|.|
Human   820 LPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTVRFSP----WGLRNASLVTYYTSSGEDILIG 880

  Fly  1474 -----SRYQVYATGFNNIGA-GEASDILNTRTKGQKPKLPEKP-RFIEVSSNSVSLHFKAWKDGG 1531
                 ::|: :|...:.:.. |....::...|...:|..|... |...::.::|.||   |    
Human   881 GLKPFTKYE-FAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSPLTPSTVRLH---W---- 937

  Fly  1532 CP--------MSHFVVESKKRDQIEWNQISNNVKPDNNYVVL------------DLEPATWYNLR 1576
            ||        :.:.::.|           ||:.:|::.:.:|            .||..|.|..:
Human   938 CPPTEPNGEIVEYLILYS-----------SNHTQPEHQWTLLTTQGNIFSAEVHGLESDTRYFFK 991

  Fly  1577 ITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRLPAWMPEWLDLNFMVPLIATVV 1641
            :.|....|              .|..:.|.|         .|.|...:.:.||::       :|.
Human   992 MGARTEVG--------------PGPFSRLQD---------VITLQEKLSDSLDMH-------SVT 1026

  Fly  1642 VVAVGIC------VVCVALSRRRADDMRGGQKDVYYDVVYNQTMGPGATLDKRRPDLRDELGYIA 1700
            .:.||:|      :.|:....||:                                         
Human  1027 GIIVGVCLGLLCLLACMCAGLRRS----------------------------------------- 1050

  Fly  1701 PPNRKLPPVPGSNYNTCDRIKRGRGGLRSNHSTWDPRRNPNLYEELK-APPVPMHGNHYGHAHGN 1764
             |:|:  .:||.:                  ||..| .||.||...: .||.|      ..||..
Human  1051 -PHRE--SLPGLS------------------STATP-GNPALYSRARLGPPSP------PAAHEL 1087

  Fly  1765 AECHYRHP--------GMEDEICPYATFHLL---GFREEMDPTKAMNFQTFPH-----------Q 1807
            ....:.||        .:||.    |..|.|   |..|....:|.......|.           :
Human  1088 ESLVHPHPQDWSPPPSDVEDR----AEVHSLMGGGVSEGRSHSKRKISWAQPSGLSWAGSWAGCE 1148

  Fly  1808 NGHAGPVPGHAGTMLPPGHPGH-------VHSR---SGSQSMPRANRYQRK---------NSQGG 1853
            ...|||.|.....:|||...|.       |:..   :|.:..|.|.|.|.:         ::..|
Human  1149 LPQAGPRPALTRALLPPAGTGQTLLLQALVYDAIKGNGRKKSPPACRNQVEAEVIVHSDFSASNG 1213

  Fly  1854 QSSIYTPAPEYDDP---------ANCAEEDQYRRYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQ 1909
            ...::....|.:||         :...:..|...:.. ...||...:.|||   |...|.||...
Human  1214 NPDLHLQDLEPEDPLPPEAPDLISGVGDPGQGAAWLD-RELGGCELAAPGP---DRLTCLPEAAS 1274

  Fly  1910 YGSQYGGPYGQP 1921
            ....|  |..||
Human  1275 ASCSY--PDLQP 1284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam1NP_001246162.1 IgI_1_Dscam 38..136 CDD:409547
Ig strand A 39..42 CDD:409547
Ig strand A' 48..52 CDD:409547
Ig strand B 55..64 CDD:409547
Ig strand C 70..76 CDD:409547
Ig strand C' 78..81 CDD:409547
Ig strand D 87..90 CDD:409547
Ig strand E 95..100 CDD:409547
Ig strand F 113..121 CDD:409547
Ig strand G 124..136 CDD:409547
IgI_2_Dscam 246..343 CDD:409545
Ig strand A 247..250 CDD:409545
Ig strand A' 260..264 CDD:409545
Ig strand B 267..274 CDD:409545
Ig strand C 282..288 CDD:409545
Ig strand C' 294..297 CDD:409545
Ig strand D 303..307 CDD:409545
Ig strand E 309..315 CDD:409545
Ig strand F 322..330 CDD:409545
Ig strand G 333..343 CDD:409545
IgC2_3_Dscam 346..426 CDD:409549 5/14 (36%)
Ig strand A 347..352 CDD:409549
Ig strand A' 355..359 CDD:409549
Ig strand B 362..372 CDD:409549
Ig strand C 377..383 CDD:409549
Ig strand C' 384..387 CDD:409549
Ig strand E 392..398 CDD:409549
Ig strand F 405..413 CDD:409549 1/1 (100%)
Ig strand G 416..426 CDD:409549 4/9 (44%)
IgI_4_Dscam 432..527 CDD:409548 29/120 (24%)
Ig strand A 432..435 CDD:409548 1/2 (50%)
Ig strand A' 441..445 CDD:409548 2/3 (67%)
Ig strand B 448..457 CDD:409548 2/12 (17%)
Ig strand C 462..468 CDD:409548 1/5 (20%)
Ig strand C' 470..473 CDD:409548 1/2 (50%)
Ig strand D 478..486 CDD:409548 1/15 (7%)
Ig strand E 490..499 CDD:409548 1/8 (13%)
Ig strand F 506..514 CDD:409548 4/7 (57%)
Ig strand G 517..527 CDD:409548 4/10 (40%)
IgI_5_Dscam 531..618 CDD:409550 28/86 (33%)
Ig strand A 531..533 CDD:409550 0/1 (0%)
Ig strand A' 538..542 CDD:409550 0/3 (0%)
Ig strand B 545..552 CDD:409550 1/6 (17%)
Ig strand C 559..565 CDD:409550 2/5 (40%)
Ig strand C' 566..568 CDD:409550 1/1 (100%)
Ig strand D 575..579 CDD:409550 0/3 (0%)
Ig strand E 582..588 CDD:409550 3/5 (60%)
Ig strand F 596..604 CDD:409550 4/7 (57%)
Ig strand G 608..618 CDD:409550 3/9 (33%)
Ig 621..718 CDD:472250 11/96 (11%)
Ig strand B 639..643 CDD:409353 0/3 (0%)
Ig strand C 653..657 CDD:409353 0/3 (0%)
Ig strand E 684..688 CDD:409353 1/3 (33%)
Ig strand F 698..703 CDD:409353 1/4 (25%)
Ig strand G 711..714 CDD:409353 0/2 (0%)
IgI_7_Dscam 721..815 CDD:409546 21/149 (14%)
Ig strand A 721..725 CDD:409546 0/3 (0%)
Ig strand A' 730..734 CDD:409546 0/3 (0%)
Ig strand B 737..746 CDD:409546 2/8 (25%)
Ig strand C 752..758 CDD:409546 2/5 (40%)
Ig strand C' 764..767 CDD:409546 0/2 (0%)
Ig strand D 775..778 CDD:409546 2/2 (100%)
Ig strand E 780..786 CDD:409546 2/54 (4%)
Ig strand F 793..801 CDD:409546 4/14 (29%)
Ig strand G 806..815 CDD:409546 1/8 (13%)
Ig 818..916 CDD:472250 28/99 (28%)
Ig strand B 836..840 CDD:409353 0/3 (0%)
Ig strand C 849..853 CDD:409353 0/3 (0%)
Ig strand E 880..884 CDD:409353 2/3 (67%)
Ig strand F 894..899 CDD:409353 1/4 (25%)
FN3 <899..1212 CDD:442628 63/315 (20%)
Ig strand G 907..910 CDD:409353 1/2 (50%)
FN3 1222..1312 CDD:238020 23/105 (22%)
Ig <1339..1406 CDD:472250 3/66 (5%)
Ig strand C 1350..1354 CDD:409358 0/3 (0%)
Ig strand E 1372..1376 CDD:409358 0/3 (0%)
Ig strand F 1386..1391 CDD:409358 0/4 (0%)
Ig strand G 1399..1402 CDD:409358 0/2 (0%)
FN3 1409..1499 CDD:238020 19/97 (20%)
FN3 1504..1584 CDD:238020 19/100 (19%)
Dscam_C 1893..2008 CDD:463546 11/29 (38%)
IGDCC4XP_047288863.1 Ig 66..148 CDD:409353 22/85 (26%)
Ig strand B 66..70 CDD:409353 1/3 (33%)
Ig strand C 82..86 CDD:409353 0/3 (0%)
Ig strand E 104..108 CDD:409353 0/3 (0%)
Ig strand F 131..136 CDD:409353 2/4 (50%)
Ig strand G 145..148 CDD:409353 0/2 (0%)
I-set 158..231 CDD:400151 25/77 (32%)
Ig strand B 173..177 CDD:409353 0/3 (0%)
Ig strand C 186..190 CDD:409353 1/3 (33%)
Ig strand E 208..212 CDD:409353 2/3 (67%)
Ig strand F 222..227 CDD:409353 2/4 (50%)
IG_like 263..400 CDD:214653 24/158 (15%)
Ig strand B 274..278 CDD:409353 0/3 (0%)
Ig strand C 287..291 CDD:409353 1/3 (33%)
Ig 419..491 CDD:472250 24/85 (28%)
Ig strand B 421..425 CDD:143205 2/9 (22%)
Ig strand C 434..438 CDD:143205 0/3 (0%)
Ig strand E 457..461 CDD:143205 2/3 (67%)
FN3 <471..>677 CDD:442628 57/212 (27%)
Ig strand F 471..476 CDD:143205 1/4 (25%)
Ig strand G 484..487 CDD:143205 0/2 (0%)
fn3 701..795 CDD:394996 24/122 (20%)
FN3 819..911 CDD:238020 18/96 (19%)
FN3 919..1011 CDD:238020 22/132 (17%)
PHA03247 <1053..1319 CDD:223021 58/269 (22%)
Blue background indicates that the domain is not in the aligned region.

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