Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334866.1 | Gene: | dscama / 568643 | ZFINID: | ZDB-GENE-050310-7 | Length: | 2025 | Species: | Danio rerio |
Alignment Length: | 1691 | Identity: | 544/1691 - (32%) |
---|---|---|---|
Similarity: | 855/1691 - (50%) | Gaps: | 89/1691 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 FLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLV---FPPFR 102
Fly 103 AEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVSQHYEEDIHKAFVIRGNSAILKCDIPSFVA 167
Fly 168 DFVNVISWHSDEKENFYPGTEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSAT 232
Fly 233 KGRLVITEPVGSVSPQLSGNGNQEHITLTRVPKMGSVTLMCPAQAYPVPFFRWYKFIEGTTRKQA 297
Fly 298 VVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGR 362
Fly 363 PAVFTCQYTGNPIKTVSWMKDGKAI---------GHSEPVLRIESVKKEDKGMYQCFVRNDQESA 418
Fly 419 EASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQ 483
Fly 484 YVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLI 548
Fly 549 VTCPVAGYPIDSIVWERDNRALPINRKQKVFP-NGTLIIENVERNSDQATYTCVAKNQEGYSARG 612
Fly 613 SLEVQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHW-----SFERSAGDYGFDQVQP 672
Fly 673 QMRTNRISEKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGS 737
Fly 738 DAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVE---EGTLHVDNIQKTNEGYYLCEA 799
Fly 800 INGIGSGLSAVIMISVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEKPIGILW------NMNNMR 858
Fly 859 LDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYA 923
Fly 924 LKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASWSEIDRV-IVPGHTTEAQVQKLSPATT 987
Fly 988 YNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGY 1052
Fly 1053 YVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTA 1117
Fly 1118 EGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVY---APSDEWYDETKRHYKKTA 1179
Fly 1180 SSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRP 1244
Fly 1245 PAQPNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKS 1309
Fly 1310 IVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITW-KIKGVEFSA--NDRMRVLPD 1371
Fly 1372 GSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDT 1436
Fly 1437 APLHGYTLHYKPEFGE-WETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTK 1500
Fly 1501 GQKPKL-PEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVESKKRDQIEWNQISNNVKPDNNYVV 1564
Fly 1565 LDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRLPAWMPEWLD 1629
Fly 1630 LNFMVPLIATVVVVAVGICVVCVALSRRRADDMRGGQKDV--YYDVVYNQTMGPGATLDKRRPDL 1692
Fly 1693 R 1693 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | 26/91 (29%) |
IG | 57..133 | CDD:214652 | 24/78 (31%) | ||
IG_like | 267..343 | CDD:214653 | 24/75 (32%) | ||
Ig | 269..340 | CDD:143165 | 23/70 (33%) | ||
IG_like | 353..425 | CDD:214653 | 21/80 (26%) | ||
IGc2 | 361..413 | CDD:197706 | 17/60 (28%) | ||
I-set | 433..527 | CDD:254352 | 33/93 (35%) | ||
IGc2 | 446..517 | CDD:197706 | 26/70 (37%) | ||
I-set | 533..618 | CDD:254352 | 30/85 (35%) | ||
IGc2 | 544..607 | CDD:197706 | 24/63 (38%) | ||
Ig | 641..714 | CDD:143165 | 22/77 (29%) | ||
IGc2 | 735..804 | CDD:197706 | 20/71 (28%) | ||
I-set | 819..914 | CDD:254352 | 30/100 (30%) | ||
Ig | 833..921 | CDD:299845 | 32/93 (34%) | ||
FN3 | 918..1011 | CDD:238020 | 32/93 (34%) | ||
FN3 | 1018..1116 | CDD:238020 | 36/97 (37%) | ||
FN3 | 1124..1217 | CDD:238020 | 34/95 (36%) | ||
FN3 | 1222..1312 | CDD:238020 | 28/89 (31%) | ||
Ig | 1339..1406 | CDD:299845 | 27/69 (39%) | ||
FN3 | 1409..1499 | CDD:238020 | 28/90 (31%) | ||
FN3 | 1504..1584 | CDD:238020 | 26/80 (33%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
dscama | XP_021334866.1 | Ig | 124..217 | CDD:325142 | 32/97 (33%) |
I-set | 236..311 | CDD:254352 | 26/86 (30%) | ||
IG_like | 321..402 | CDD:214653 | 21/80 (26%) | ||
I-set | 408..502 | CDD:333254 | 33/93 (35%) | ||
IGc2 | 524..579 | CDD:197706 | 22/54 (41%) | ||
Ig | 614..679 | CDD:319273 | 21/75 (28%) | ||
Ig_DSCAM | 708..787 | CDD:143211 | 21/78 (27%) | ||
Ig | 805..898 | CDD:325142 | 32/93 (34%) | ||
FN3 | 894..988 | CDD:238020 | 32/94 (34%) | ||
FN3 | 995..1092 | CDD:238020 | 36/97 (37%) | ||
fn3 | 1100..1186 | CDD:306538 | 31/88 (35%) | ||
fn3 | 1199..1282 | CDD:306538 | 25/83 (30%) | ||
Ig | 1312..1377 | CDD:319273 | 24/64 (38%) | ||
fn3 | 1405..1471 | CDD:306538 | 18/65 (28%) | ||
FN3 | 1492..1563 | CDD:238020 | 24/71 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4915 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 917 | 1.000 | Inparanoid score | I353 |
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm6394 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 1 | 1.100 | - | - | O | PTHR10075 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1391 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.840 |