Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021323628.1 | Gene: | ptprq / 555426 | ZFINID: | ZDB-GENE-050419-183 | Length: | 2896 | Species: | Danio rerio |
Alignment Length: | 1825 | Identity: | 360/1825 - (19%) |
---|---|---|---|
Similarity: | 612/1825 - (33%) | Gaps: | 625/1825 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 230 SATKGRLVIT--------------EPVGSVSPQLSGNGNQEHITLTRVPKMGSVTL----MCPAQ 276
Fly 277 AYPVP-FFRWYKFIE-----------GTTR--KQAVVLNDRVKQVSGTLIIK------------D 315
Fly 316 AVVED--------------SG---KYLCVVNNSVGGESVET-------VLTVTAP--------LS 348
Fly 349 AKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSEPVLRIESVKKEDKGMYQCFVRN 413
Fly 414 DQESAEASAELKLG-GRFDPPVIR--QAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIAN 475
Fly 476 NDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHS--------AKLNVYGLPY 532
Fly 533 IRQMEKKAIVAGETLIVT--------CPVAGY-----------PIDSIVWER-DNRALPINRKQK 577
Fly 578 VFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAYEDLINMGDSIDLF 642
Fly 643 CQIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRISEKT--SMISIPSASPAHT-GRDTCIAS 704
Fly 705 NKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYK-- 767
Fly 768 -DLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLRNQTAR 831
Fly 832 RGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTI-REEILSTGVMSSLSIKRTERSDSALF 895
Fly 896 TCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRA 960
Fly 961 SWSEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTS--QSSEAVTIITAEEAPSGKPQNI 1023
Fly 1024 KVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLR 1088
Fly 1089 VYTQYSVVIQAFNKIGAG-PLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANG 1152
Fly 1153 VIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPI---- 1213
Fly 1214 -----HC-----QTEPDVP------------------EAP------------------------- 1225
Fly 1226 TDVKALV-----------------MGNAAILV------------------------------SWR 1243
Fly 1244 PPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSK 1308
Fly 1309 SIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGS 1373
Fly 1374 LLIKSVNRQDAGDYSCHA-----------------ENSIAKDSITHKLIVLAPPQSPHVTLSATT 1421
Fly 1422 TDA--LTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFN 1484
Fly 1485 NIGAGEA---SDILNTRTKGQKPKLP-----EKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVES 1541
Fly 1542 KKRDQIEWNQISN-NVKPDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPL 1605
Fly 1606 DDGSGHGNVHTRIRLPAWMPEWLDLNFMVPLIATVVVVAVGICVVCVALSRRRADDMRGGQKDVY 1670
Fly 1671 YDVVYNQTMGPGATLDKRRPDLRDELGYIAPPNR-----------------KLPPVPGSNYNTCD 1718
Fly 1719 RIKRGRGGLRSNHSTWDPRRNPNLYEELKAPPVPMHGNHYGHAHGNAECHY---RHPGMEDEICP 1780
Fly 1781 YATFH 1785 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | 27/129 (21%) | ||
Ig | 269..340 | CDD:143165 | 26/124 (21%) | ||
IG_like | 353..425 | CDD:214653 | 16/71 (23%) | ||
IGc2 | 361..413 | CDD:197706 | 11/51 (22%) | ||
I-set | 433..527 | CDD:254352 | 18/103 (17%) | ||
IGc2 | 446..517 | CDD:197706 | 12/70 (17%) | ||
I-set | 533..618 | CDD:254352 | 14/104 (13%) | ||
IGc2 | 544..607 | CDD:197706 | 9/82 (11%) | ||
Ig | 641..714 | CDD:143165 | 14/75 (19%) | ||
IGc2 | 735..804 | CDD:197706 | 16/71 (23%) | ||
I-set | 819..914 | CDD:254352 | 10/95 (11%) | ||
Ig | 833..921 | CDD:299845 | 9/88 (10%) | ||
FN3 | 918..1011 | CDD:238020 | 19/94 (20%) | ||
FN3 | 1018..1116 | CDD:238020 | 26/98 (27%) | ||
FN3 | 1124..1217 | CDD:238020 | 33/106 (31%) | ||
FN3 | 1222..1312 | CDD:238020 | 32/179 (18%) | ||
Ig | 1339..1406 | CDD:299845 | 16/83 (19%) | ||
FN3 | 1409..1499 | CDD:238020 | 16/94 (17%) | ||
FN3 | 1504..1584 | CDD:238020 | 19/85 (22%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
ptprq | XP_021323628.1 | fn3 | 209..278 | CDD:306538 | |
FN3 | 301..363 | CDD:328772 | |||
FN3 | 382..470 | CDD:238020 | 2/9 (22%) | ||
FN3 | 475..569 | CDD:238020 | 24/101 (24%) | ||
FN3 | 723..808 | CDD:238020 | 23/115 (20%) | ||
FN3 | 829..>864 | CDD:238020 | 5/63 (8%) | ||
FN3 | <1033..1067 | CDD:238020 | 5/38 (13%) | ||
FN3 | 1072..1161 | CDD:238020 | 19/92 (21%) | ||
fn3 | 1170..1241 | CDD:306538 | 21/82 (26%) | ||
fn3 | 1264..1340 | CDD:306538 | 30/83 (36%) | ||
fn3 | 1368..>1410 | CDD:306538 | 4/41 (10%) | ||
FN3 | 1460..1549 | CDD:238020 | 25/109 (23%) | ||
FN3 | 1585..1670 | CDD:214495 | 24/136 (18%) | ||
FN3 | 1697..1768 | CDD:238020 | 19/81 (23%) | ||
FN3 | 1781..1872 | CDD:238020 | 17/125 (14%) | ||
fn3 | 1878..1958 | CDD:306538 | 18/71 (25%) | ||
FN3 | 2029..2133 | CDD:238020 | |||
FN3 | 2141..2235 | CDD:238020 | |||
FN3 | 2242..2338 | CDD:238020 | |||
UP_III_II | 2354..>2491 | CDD:297589 | |||
PTPc | 2599..2855 | CDD:214550 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 60 | 1.000 | Domainoid score | I10555 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |