Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006247755.1 | Gene: | Sdk2 / 360652 | RGDID: | 1310397 | Length: | 2175 | Species: | Rattus norvegicus |
Alignment Length: | 2368 | Identity: | 501/2368 - (21%) |
---|---|---|---|
Similarity: | 838/2368 - (35%) | Gaps: | 583/2368 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 MPNE-RLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGN 66
Fly 67 PMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYR------QEVHAQVYACLARNQFGS 125
Fly 126 IISRDVHVRAVVSQHYEEDIHKAFVIRGNSAILKCD-IPSFVADFVNVISWHSDEKENFYPGTEY 189
Fly 190 DGKYLVLPSGELHI---------REVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSV 245
Fly 246 SPQLSGNGNQEHITLTRVPKMGS-------VTLMCPAQAYPVPFFR--WYKFIEGTTRKQAVVLN 301
Fly 302 DRVKQVSGTLIIKDAVVEDSGKYLC---VVNNSVGGESVETVLTVTAPLSAKIDPPTQ-TVDFGR 362
Fly 363 PAVFTCQYTGNPIKTVSWMKDGKAI---------GHSEPVLRIESVKKEDKGMYQCFVRNDQESA 418
Fly 419 EASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQ 483
Fly 484 YVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYI-RQMEKKAIVAGETL 547
Fly 548 IVTCPVAGYPIDSI--VWERDNRALPI--NRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGY 608
Fly 609 SARGSLEVQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFDQVQPQ 673
Fly 674 MR-TNRISEKTSMISIPSAS--------------PAHTGRDTCIASNKAGTTTYSVDL-TVNVPP 722
Fly 723 RWILEPTDKAFAQGS---------DAKVECKADGFPKPQVTWKKAVGDTPG-EYKDLKKSD--NI 775
Fly 776 RVEE---------------------------------------GTLHVDNIQKTNEGYY----LC 797
Fly 798 EAINGIGSGLSAVI--------MISVQAPPEFTEK--------LRNQT--------------ARR 832
Fly 833 GEPAVLQCEAKGEKPIG-------------ILWN--------MNNMRLDPKNDNRYTIREEILST 876
Fly 877 GVMSSLSIKRTERSDSALFT----CVATNAFGSDDASINMIVQEV-PEMPYA---LKVLDKSGRS 933
Fly 934 VQLSWAQPYDGNSPLDRYIIEFK----RSRASWSEIDRVIVPGHTTEAQVQKLSPATTYNIRIVA 994
Fly 995 ENAIGTSQSSE-AVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNG--EILGYYVGY 1056
Fly 1057 KLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTP 1121
Fly 1122 SQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHY--KKTASSDTV 1184
Fly 1185 LHGLKKYTNYTMQVLATTAGGDGVRS-VPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQP 1248
Fly 1249 NGIITQYTVYSKAEGAETETKTQKV--PHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIV 1311
Fly 1312 AMPS----DQVPAKIASFDDTFTATFKEDAKMPCLAVG--------AP----------QPEITWK 1354
Fly 1355 IKGVEFSAN------DRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSP 1413
Fly 1414 HVTLSAT--TTDALTVKLKPHEGD--TAPLHGYTLHYKPEFGE----------------WE--TS 1456
Fly 1457 EVSVDS------QKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFI-- 1513
Fly 1514 ---EVSSNSVSLHFK-------AWKDGGCPMSH----------FVVESKKRDQIEWNQISNNVKP 1558
Fly 1559 DNNYVVLDLEPATWYNLRITAHNSAG-----------------FTVAEYDFATLTVTGGTIA--- 1603
Fly 1604 -------------------PLDDGSGHGNVHTRIRLPAW-----MPEWLDLNFMVPLIATVVVVA 1644
Fly 1645 VGICVVCVALSRRRADDMRGGQKDVYYDVVYNQTMGPGATLDKRRPDLRDELGYIAPPNRKLPPV 1709
Fly 1710 PGSNYNTCDRIKRGRGGLRSNHSTWDPRRNPNLYEELKAPP------------VPMHGNHYGHAH 1762
Fly 1763 GNAECHYRHPGMEDEICPYATFHLLGFREEMDPTKAMNFQTFPHQNGHAGP-------------- 1813
Fly 1814 -------------VPGH---------AGTMLPPGHPGHVHSRSGSQSMPRA-----NRYQRKNSQ 1851
Fly 1852 GGQSSIYTPAPEYDDPANC--AEEDQYRRYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQYGSQY 1914
Fly 1915 GGPYGQPYDHYGS----RGSMGRRSIGSARNPGNGSPEPPPPPPRNHDMSNSSFNDSKESNEISE 1975
Fly 1976 AECDRDHGPRGNYGAVKRSPQPKDQRTT 2003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | 21/97 (22%) |
IG | 57..133 | CDD:214652 | 18/81 (22%) | ||
IG_like | 267..343 | CDD:214653 | 20/87 (23%) | ||
Ig | 269..340 | CDD:143165 | 18/75 (24%) | ||
IG_like | 353..425 | CDD:214653 | 20/81 (25%) | ||
IGc2 | 361..413 | CDD:197706 | 15/60 (25%) | ||
I-set | 433..527 | CDD:254352 | 30/93 (32%) | ||
IGc2 | 446..517 | CDD:197706 | 21/70 (30%) | ||
I-set | 533..618 | CDD:254352 | 22/89 (25%) | ||
IGc2 | 544..607 | CDD:197706 | 19/66 (29%) | ||
Ig | 641..714 | CDD:143165 | 18/87 (21%) | ||
IGc2 | 735..804 | CDD:197706 | 16/123 (13%) | ||
I-set | 819..914 | CDD:254352 | 20/141 (14%) | ||
Ig | 833..921 | CDD:299845 | 19/113 (17%) | ||
FN3 | 918..1011 | CDD:238020 | 28/100 (28%) | ||
FN3 | 1018..1116 | CDD:238020 | 29/99 (29%) | ||
FN3 | 1124..1217 | CDD:238020 | 33/95 (35%) | ||
FN3 | 1222..1312 | CDD:238020 | 26/91 (29%) | ||
Ig | 1339..1406 | CDD:299845 | 16/90 (18%) | ||
FN3 | 1409..1499 | CDD:238020 | 23/117 (20%) | ||
FN3 | 1504..1584 | CDD:238020 | 16/101 (16%) | ||
Dscam_C | 1890..2008 | CDD:289151 | 22/118 (19%) | ||
Sdk2 | XP_006247755.1 | IG_like | 43..112 | CDD:214653 | 19/87 (22%) |
IGc2 | 43..101 | CDD:197706 | 16/76 (21%) | ||
IG_like | 123..206 | CDD:214653 | 19/109 (17%) | ||
Ig | 135..191 | CDD:299845 | 13/73 (18%) | ||
IG_like | 225..307 | CDD:214653 | 21/89 (24%) | ||
IGc2 | 236..289 | CDD:197706 | 16/60 (27%) | ||
I-set | 311..400 | CDD:254352 | 21/88 (24%) | ||
Ig | 329..397 | CDD:143165 | 18/67 (27%) | ||
I-set | 405..495 | CDD:254352 | 30/93 (32%) | ||
Ig | 419..495 | CDD:299845 | 27/79 (34%) | ||
Ig | 505..589 | CDD:299845 | 21/85 (25%) | ||
IG_like | 505..589 | CDD:214653 | 21/85 (25%) | ||
FN3 | 593..684 | CDD:238020 | 23/109 (21%) | ||
FN3 | 696..789 | CDD:238020 | 12/92 (13%) | ||
FN3 | 797..893 | CDD:238020 | 16/95 (17%) | ||
FN3 | 898..986 | CDD:238020 | 14/91 (15%) | ||
FN3 | 996..1090 | CDD:238020 | 25/93 (27%) | ||
FN3 | 1102..1197 | CDD:238020 | 29/98 (30%) | ||
FN3 | 1204..1293 | CDD:238020 | 31/90 (34%) | ||
FN3 | 1304..1397 | CDD:238020 | 27/93 (29%) | ||
FN3 | 1403..1487 | CDD:238020 | 16/93 (17%) | ||
FN3 | 1506..1619 | CDD:238020 | 24/127 (19%) | ||
FN3 | 1629..1722 | CDD:238020 | 15/96 (16%) | ||
FN3 | 1727..1808 | CDD:238020 | 14/103 (14%) | ||
FN3 | 1840..1919 | CDD:238020 | 12/89 (13%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 63 | 1.000 | Domainoid score | I10040 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |