Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001025073.2 | Gene: | Ptprk / 360302 | RGDID: | 619706 | Length: | 1439 | Species: | Rattus norvegicus |
Alignment Length: | 1028 | Identity: | 218/1028 - (21%) |
---|---|---|---|
Similarity: | 354/1028 - (34%) | Gaps: | 276/1028 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 763 PGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLRN 827
Fly 828 QTARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIRE--EILSTGVMSSLSIKRTERS 890
Fly 891 DSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRS---VQLSWAQPYDGNSPLDRYI 952
Fly 953 IEFKRSRASWSEIDRVIVPGHTTEAQVQKLSPATTYNIRIV----AENAIGTSQSSEAVTIITAE 1013
Fly 1014 EAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFE-TINFITEEG 1077
Fly 1078 KEHN------LEL---------QNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSD 1127
Fly 1128 TACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAP-----------------SDEWYDETKRHY 1175
Fly 1176 KKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAP--TDVKALVMGNAAI 1238
Fly 1239 LVSWRPPAQPNGI-ITQYTVY--------SKAEGAETETKTQKVP-HYQMSFEATELEKNKPYEF 1293
Fly 1294 WV---------TASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTA--TFKEDAKMPCL----- 1342
Fly 1343 AVGAPQPEI----------TWKIKGVEFSANDRMRVLPDGSLLIKSV---------NRQDA-GDY 1387
Fly 1388 SCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGE 1452
Fly 1453 WETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIEVSS 1517
Fly 1518 NSVSLHFKAWKDGGCPMSHFVVES-----KKRDQIE-WNQISNNVKPDNNYVVL---DLEPATWY 1573
Fly 1574 NLRITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRLPAWMPEWLDLNFMVPLIA 1638
Fly 1639 TVVVVAVGIC---------------VVCV-------------ALSRRRADDMR 1663 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 | |||
I-set | 533..618 | CDD:254352 | |||
IGc2 | 544..607 | CDD:197706 | |||
Ig | 641..714 | CDD:143165 | |||
IGc2 | 735..804 | CDD:197706 | 9/40 (23%) | ||
I-set | 819..914 | CDD:254352 | 20/96 (21%) | ||
Ig | 833..921 | CDD:299845 | 18/89 (20%) | ||
FN3 | 918..1011 | CDD:238020 | 25/99 (25%) | ||
FN3 | 1018..1116 | CDD:238020 | 25/113 (22%) | ||
FN3 | 1124..1217 | CDD:238020 | 25/109 (23%) | ||
FN3 | 1222..1312 | CDD:238020 | 27/110 (25%) | ||
Ig | 1339..1406 | CDD:299845 | 19/91 (21%) | ||
FN3 | 1409..1499 | CDD:238020 | 18/89 (20%) | ||
FN3 | 1504..1584 | CDD:238020 | 20/88 (23%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
Ptprk | NP_001025073.2 | MAM | 31..191 | CDD:214533 | 8/33 (24%) |
MAM | 35..191 | CDD:99706 | 8/33 (24%) | ||
IG_like | 201..287 | CDD:214653 | 17/90 (19%) | ||
Ig | 203..283 | CDD:299845 | 17/84 (20%) | ||
fn3 | 293..371 | CDD:278470 | 22/84 (26%) | ||
FN3 | 487..588 | CDD:238020 | 26/114 (23%) | ||
PTPc | 886..1140 | CDD:214550 | 35/178 (20%) | ||
PTPc | 913..1140 | CDD:238006 | 27/146 (18%) | ||
Y_phosphatase | 1200..1434 | CDD:278528 | |||
PTPc | 1202..1434 | CDD:238006 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |