Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101611.1 | Gene: | Dscaml1 / 315615 | RGDID: | 1304887 | Length: | 2111 | Species: | Rattus norvegicus |
Alignment Length: | 2135 | Identity: | 622/2135 - (29%) |
---|---|---|---|
Similarity: | 976/2135 - (45%) | Gaps: | 296/2135 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 GSQTLAANPPDADQKGPV----------------------------FLKEPTNRIDFSNSTGAEI 59
Fly 60 ECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFG 124
Fly 125 SIISRDVHVRAVVSQHYEEDIHKAFVIRGNSAILKCDIPSFVADFVNVISWHSDEKENFYPGTEY 189
Fly 190 DGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSVSPQLSGNGN 254
Fly 255 QE----HITLTRVPKMGSVTLMCPAQAYPVPFFRWYKFIEGTTRKQAVVLNDR-VKQVSGTLIIK 314
Fly 315 DAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVS 379
Fly 380 WMKD------GKAI---GHSEPVLRIESVKKEDKGMYQCFVRNDQESAEASAELKLGGRFDPPVI 435
Fly 436 RQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSV 500
Fly 501 HANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWER 565
Fly 566 DNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAYE 630
Fly 631 DLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRISEKTSMISIPSASPAH 695
Fly 696 TGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVG 760
Fly 761 D-TPGEYKDLKKSDNIRV-EEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTE 823
Fly 824 KLRNQTARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTE 888
Fly 889 RSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYII 953
Fly 954 EFKRSRASW--SEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAP 1016
Fly 1017 SGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHN 1081
Fly 1082 LELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPP 1146
Fly 1147 LESANGVIKTYKVVY---APSDEWYDETKRHYKKTASSDTV-LHGLKKYTNYTMQVLATTAGGDG 1207
Fly 1208 VRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEG------AET 1266
Fly 1267 ETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTA 1331
Fly 1332 TFKEDAKMPCLAVGAPQPEITW----KIKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAE 1392
Fly 1393 NSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFG-EWETS 1456
Fly 1457 EVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKL-PEKPRFIEVSSNSV 1520
Fly 1521 SLHFKAWKDGGCPMSHFVVESKKRDQIEWNQISNNVKPDNNYVVLDLEPATWYNLRITAHNSAGF 1585
Fly 1586 TVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRLPAWMPEWLDLNFMVPLIATVVVVAVGICVV 1650
Fly 1651 CVALSRRRADDMRGGQKDVYYDVVYNQTMGPGATLDKRRPDLRDELG----YIAPPNRKL-PPVP 1710
Fly 1711 GSNYNTCDRIKRGRGGLRSNHSTWDPRRNPNLYEELKAPPVPMHGNHYGHAHGNAECHYRHPGME 1775
Fly 1776 DEICPYATFHLLGFREEMDP------TKAMNFQTFPHQNGHAGPVPGHAGTMLPPGHPGHVHS-- 1832
Fly 1833 --------RSGSQSMPRANRYQRKNSQGGQSSIYTPAP-EYDDPANCAEEDQYRRYTRVNSQGG- 1887
Fly 1888 ------SLYSGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDH-----------------YGSRG 1929
Fly 1930 SMGRRSIGSARNPGN----GSPEPP--------PPPPRNHDMSNS-------SFNDSKESN---- 1971
Fly 1972 EISEAECDRDHGPRGNYGAVKRSPQPKDQRTTEEMRKLIERNETGPKQLQLQQAN 2026 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | 29/119 (24%) |
IG | 57..133 | CDD:214652 | 22/75 (29%) | ||
IG_like | 267..343 | CDD:214653 | 28/76 (37%) | ||
Ig | 269..340 | CDD:143165 | 26/71 (37%) | ||
IG_like | 353..425 | CDD:214653 | 24/80 (30%) | ||
IGc2 | 361..413 | CDD:197706 | 21/60 (35%) | ||
I-set | 433..527 | CDD:254352 | 32/93 (34%) | ||
IGc2 | 446..517 | CDD:197706 | 23/70 (33%) | ||
I-set | 533..618 | CDD:254352 | 33/84 (39%) | ||
IGc2 | 544..607 | CDD:197706 | 25/62 (40%) | ||
Ig | 641..714 | CDD:143165 | 24/72 (33%) | ||
IGc2 | 735..804 | CDD:197706 | 23/70 (33%) | ||
I-set | 819..914 | CDD:254352 | 31/94 (33%) | ||
Ig | 833..921 | CDD:299845 | 33/87 (38%) | ||
FN3 | 918..1011 | CDD:238020 | 34/94 (36%) | ||
FN3 | 1018..1116 | CDD:238020 | 34/97 (35%) | ||
FN3 | 1124..1217 | CDD:238020 | 34/96 (35%) | ||
FN3 | 1222..1312 | CDD:238020 | 29/95 (31%) | ||
Ig | 1339..1406 | CDD:299845 | 21/70 (30%) | ||
FN3 | 1409..1499 | CDD:238020 | 24/90 (27%) | ||
FN3 | 1504..1584 | CDD:238020 | 23/80 (29%) | ||
Dscam_C | 1890..2008 | CDD:289151 | 27/157 (17%) | ||
Dscaml1 | NP_001101611.1 | IG | 101..173 | CDD:214652 | 21/71 (30%) |
IGc2 | 101..168 | CDD:197706 | 19/66 (29%) | ||
Ig | 183..276 | CDD:299845 | 34/98 (35%) | ||
IG_like | 195..276 | CDD:214653 | 33/86 (38%) | ||
I-set | 291..369 | CDD:254352 | 31/94 (33%) | ||
IGc2 | 298..359 | CDD:197706 | 26/77 (34%) | ||
IGc2 | 386..447 | CDD:197706 | 21/60 (35%) | ||
I-set | 466..560 | CDD:254352 | 32/93 (34%) | ||
Ig | 466..556 | CDD:299845 | 31/89 (35%) | ||
IGc2 | 577..635 | CDD:197706 | 24/57 (42%) | ||
IG_like | 665..744 | CDD:214653 | 26/84 (31%) | ||
Ig | 673..739 | CDD:143165 | 24/71 (34%) | ||
I-set | 748..843 | CDD:254352 | 28/94 (30%) | ||
Ig7_DSCAM | 765..843 | CDD:143211 | 24/77 (31%) | ||
I-set | 849..942 | CDD:254352 | 31/92 (34%) | ||
Ig | 861..949 | CDD:299845 | 33/87 (38%) | ||
FN3 | 945..1039 | CDD:238020 | 34/95 (36%) | ||
FN3 | 1046..1143 | CDD:238020 | 34/97 (35%) | ||
fn3 | 1151..1237 | CDD:278470 | 32/89 (36%) | ||
FN3 | 1249..1340 | CDD:238020 | 29/95 (31%) | ||
IGc2 | 1364..1428 | CDD:197706 | 19/63 (30%) | ||
FN3 | 1442..1532 | CDD:238020 | 23/89 (26%) | ||
FN3 | 1546..1618 | CDD:238020 | 24/73 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4784 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H79549 | |
Inparanoid | 1 | 1.050 | 968 | 1.000 | Inparanoid score | I306 |
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9015 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 1 | 1.100 | - | - | O | PTHR10075 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1391 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.840 |