Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958192.1 | Gene: | Igsf10 / 310448 | RGDID: | 735030 | Length: | 2647 | Species: | Rattus norvegicus |
Alignment Length: | 1386 | Identity: | 283/1386 - (20%) |
---|---|---|---|
Similarity: | 464/1386 - (33%) | Gaps: | 448/1386 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 VISWHSDEKENFYPGTEYDGKYLVLPSGELHIREVGPEDGY--KSYQCRTKHRLTGETRLSATKG 234
Fly 235 RLVITEPVGSVSPQLS---------------------------GNGNQEHITLTRVPKM------ 266
Fly 267 --------------GSVTLMCPAQAYPVPFFRW------YKFIEGTTRKQAVVLNDRVKQVSGTL 311
Fly 312 IIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQ--TVDFGRPAVFTCQYTGNP 374
Fly 375 IKTVSWMKDGKAIGHS------------EPVLRIESVKKEDKGMYQCFVRNDQESAEASAELKLG 427
Fly 428 GRFDPPVI----RQAFQEETMEPGPSVFLKCVAGGNPTPEISWEL-DGKKI----ANNDRYQVGQ 483
Fly 484 YVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNV---YGLPYIRQMEKK--AIVA 543
Fly 544 GETLIVTCPVAGYPIDSIVWERDNRAL-----PINRKQKVFPNGTLIIENVERNSDQATYTCVAK 603
Fly 604 NQEGYSARGSLEVQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFD 668
Fly 669 QVQPQMRTNRISEKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAF 733
Fly 734 AQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDN--------IRVEEGTLHVDNIQKT 790
Fly 791 NEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLR-NQTARRGEPAVLQCEAKGEKPIGILWNM 854
Fly 855 NNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPE 919
Fly 920 M---PYALKVLDKSGR----------------SVQLSWAQPYDGNSPLDRYIIEFKRSRASWSEI 965
Fly 966 DRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEE---------------- 1014
Fly 1015 --APSGKPQNIKVEPVNQTTMRVTWKPPPRTEW-----NGEIL----GYYVGYKLSNTNSSYVFE 1068
Fly 1069 TINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTL 1133
Fly 1134 TSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQV 1198
Fly 1199 LATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEG 1263
Fly 1264 AETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDT 1328
Fly 1329 FTATFKEDAKMPCLAVGAPQPEITWKI-------KGVEFSANDRMRVLPDGSLLIKSVNRQDAGD 1386
Fly 1387 YSCHAENSIAKDSITHKLIVL 1407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | 23/81 (28%) | ||
Ig | 269..340 | CDD:143165 | 22/76 (29%) | ||
IG_like | 353..425 | CDD:214653 | 19/85 (22%) | ||
IGc2 | 361..413 | CDD:197706 | 14/63 (22%) | ||
I-set | 433..527 | CDD:254352 | 32/102 (31%) | ||
IGc2 | 446..517 | CDD:197706 | 24/75 (32%) | ||
I-set | 533..618 | CDD:254352 | 24/91 (26%) | ||
IGc2 | 544..607 | CDD:197706 | 21/67 (31%) | ||
Ig | 641..714 | CDD:143165 | 3/72 (4%) | ||
IGc2 | 735..804 | CDD:197706 | 23/76 (30%) | ||
I-set | 819..914 | CDD:254352 | 24/95 (25%) | ||
Ig | 833..921 | CDD:299845 | 23/90 (26%) | ||
FN3 | 918..1011 | CDD:238020 | 22/111 (20%) | ||
FN3 | 1018..1116 | CDD:238020 | 20/106 (19%) | ||
FN3 | 1124..1217 | CDD:238020 | 21/92 (23%) | ||
FN3 | 1222..1312 | CDD:238020 | 8/89 (9%) | ||
Ig | 1339..1406 | CDD:299845 | 20/73 (27%) | ||
FN3 | 1409..1499 | CDD:238020 | |||
FN3 | 1504..1584 | CDD:238020 | |||
Dscam_C | 1890..2008 | CDD:289151 | |||
Igsf10 | XP_038958192.1 | LRRNT | 78..110 | CDD:214470 | |
leucine-rich repeat | 89..108 | CDD:275380 | |||
leucine-rich repeat | 109..132 | CDD:275380 | |||
LRR_8 | 131..191 | CDD:404697 | |||
leucine-rich repeat | 133..156 | CDD:275380 | |||
leucine-rich repeat | 157..180 | CDD:275380 | |||
LRR_8 | 180..245 | CDD:404697 | |||
leucine-rich repeat | 181..204 | CDD:275380 | |||
leucine-rich repeat | 205..228 | CDD:275380 | |||
leucine-rich repeat | 229..260 | CDD:275380 | |||
PCC | 242..>323 | CDD:188093 | |||
LRRCT | 269..>293 | CDD:214507 | |||
Ig | 532..605 | CDD:416386 | |||
Ig strand A' | 534..537 | CDD:409353 | |||
Ig strand B | 543..550 | CDD:409353 | |||
Ig strand C | 556..562 | CDD:409353 | |||
Ig strand C' | 564..566 | CDD:409353 | |||
Ig strand D | 577..581 | CDD:409353 | |||
Ig strand E | 584..589 | CDD:409353 | |||
Ig strand F | 597..605 | CDD:409353 | |||
IG | 632..712 | CDD:214652 | |||
Herpes_BLLF1 | <1189..1500 | CDD:282904 | |||
Ig | 1690..1763 | CDD:416386 | 22/78 (28%) | ||
Ig strand B | 1690..1694 | CDD:409353 | 2/3 (67%) | ||
Ig strand C | 1703..1707 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 1730..1734 | CDD:409353 | 3/3 (100%) | ||
Ig strand F | 1744..1749 | CDD:409353 | 3/4 (75%) | ||
Ig strand G | 1758..1761 | CDD:409353 | 0/2 (0%) | ||
Ig | 1768..1861 | CDD:416386 | 21/94 (22%) | ||
Ig strand A | 1768..1771 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 1776..1780 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 1786..1795 | CDD:409353 | 1/8 (13%) | ||
Ig strand C | 1800..1805 | CDD:409353 | 4/4 (100%) | ||
Ig strand C' | 1808..1810 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 1819..1822 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 1827..1834 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 1840..1848 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 1851..1861 | CDD:409353 | 2/9 (22%) | ||
Ig_3 | 1865..1944 | CDD:404760 | 29/89 (33%) | ||
Ig strand A | 1866..1869 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 1875..1878 | CDD:409353 | 1/2 (50%) | ||
Ig strand B | 1884..1891 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 1897..1903 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 1909..1911 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 1917..1922 | CDD:409353 | 1/8 (13%) | ||
Ig strand E | 1924..1928 | CDD:409353 | 2/7 (29%) | ||
Ig strand F | 1937..1945 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 1948..1958 | CDD:409353 | 2/9 (22%) | ||
Ig_3 | 1965..2044 | CDD:404760 | 23/79 (29%) | ||
putative Ig strand B | 1980..1990 | CDD:409353 | 4/9 (44%) | ||
putative Ig strand C | 1996..2002 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand D | 2018..2021 | CDD:409353 | 1/2 (50%) | ||
putative Ig strand E | 2023..2029 | CDD:409353 | 2/5 (40%) | ||
putative Ig strand F | 2036..2044 | CDD:409353 | 4/7 (57%) | ||
IG_like | 2077..2160 | CDD:214653 | 25/85 (29%) | ||
Ig strand B | 2078..2085 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 2093..2097 | CDD:409353 | 1/3 (33%) | ||
Ig strand D | 2122..2125 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 2126..2131 | CDD:409353 | 3/4 (75%) | ||
Ig strand F | 2139..2147 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 2153..2160 | CDD:409353 | 1/6 (17%) | ||
IG | 2178..2252 | CDD:214652 | 23/80 (29%) | ||
IG_like | 2283..2354 | CDD:214653 | 17/89 (19%) | ||
Ig strand C | 2294..2298 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 2320..2324 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 2334..2339 | CDD:409353 | 0/11 (0%) | ||
Ig_3 | 2360..2439 | CDD:404760 | 16/92 (17%) | ||
Ig strand B | 2379..2383 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 2392..2396 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 2418..2422 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 2432..2437 | CDD:409353 | 1/5 (20%) | ||
Ig_3 | 2455..2534 | CDD:404760 | 22/112 (20%) | ||
Ig_3 | 2551..2633 | CDD:404760 | 22/163 (13%) | ||
Ig strand A | 2552..2555 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 2561..2564 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 2570..2577 | CDD:409353 | 2/38 (5%) | ||
Ig strand C | 2583..2591 | CDD:409353 | 2/7 (29%) | ||
Ig strand C' | 2596..2598 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 2604..2610 | CDD:409353 | 0/5 (0%) | ||
Ig strand E | 2612..2616 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 2625..2633 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 2636..2646 | CDD:409353 | 2/9 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |