Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017448778.1 | Gene: | Csf3r / 298518 | RGDID: | 1309114 | Length: | 877 | Species: | Rattus norvegicus |
Alignment Length: | 907 | Identity: | 171/907 - (18%) |
---|---|---|---|
Similarity: | 288/907 - (31%) | Gaps: | 301/907 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 617 QVMVLPQIVPFAYEDLINMGDSIDLFCQI----QKGDRPIKVHWSFERSAGDYGFDQVQPQMRTN 677
Fly 678 RISE--KTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAK 740
Fly 741 VEC---------KADGFPKPQVTWKKAVGDTPGEY--KDLKKSDNIRVEEGTLHVDNIQKTNEGY 794
Fly 795 YLC-----------------EAINGIGSGLSAVIMI--------SVQAPPEFTEKLRNQTARRGE 834
Fly 835 PAVLQ--------------------------------CEAKGEKPI-GILWNMNNMRLDPKNDNR 866
Fly 867 YTIREEILSTGV--------MSSLSIKRTERSD------SALFT----CVATNAFGS-DDASINM 912
Fly 913 IVQEVPEMP-------YALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASWSEID---R 967
Fly 968 VIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTS---------QSSEAVTIITAE---------- 1013
Fly 1014 -EAPSGKPQNIKVE--PVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITE 1075
Fly 1076 EGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQT-IR 1139
Fly 1140 VGWV--SPPLESANGVIK-TYKVVYAPSDEWYDETKRHYKKTAS---SDTVLHGLKKYTNYTMQV 1198
Fly 1199 LATTAGGD----------------------GVRS---VPIHCQTE-------------PDVPEAP 1225
Fly 1226 TDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKP 1290
Fly 1291 YEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAP-QPEI 1351 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 |