DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dscam1 and ttn-1

DIOPT Version :9

Sequence 1:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster
Sequence 2:NP_001346715.1 Gene:ttn-1 / 266969 WormBaseID:WBGene00006436 Length:15188 Species:Caenorhabditis elegans


Alignment Length:1631 Identity:348/1631 - (21%)
Similarity:575/1631 - (35%) Gaps:398/1631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 TEPVGSVSPQLSGNGNQEHITLTRVPKMGSV--TLMCPAQAYPVPFFRWYKFIEGTT---RKQAV 298
            |:...||..||      |.|    |..:|.:  ||.|.....|.|..:|||..:..|   .|...
 Worm 12890 TDAAPSVKKQL------EDI----VANVGDLIATLSCDVDGVPSPKVQWYKDDKELTVPSMKYDS 12944

  Fly   299 VLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTV-----------TAP--LSAK 350
            ..|:.:.:    |.:|:.|..|:|||.|...|.:|.......|:|           |:|  :..|
 Worm 12945 FYNEGLAE----LTVKNIVESDAGKYTCRATNDLGSIMTHAKLSVKADEKKKKKSKTSPAVIEKK 13005

  Fly   351 IDPPTQTV----------------------DFGRPAVFTCQYTGNPIKTVSWMKDGKAI------ 387
            .|..|..|                      ..|.|.:.....|..|..||.|..:|:.|      
 Worm 13006 KDRKTSKVVVIEEMIDMPPNFHHLLQDDEAKIGEPKILVVTNTTLPEPTVDWYHNGEHISINDSN 13070

  Fly   388 -------GHSEPVLRIESVKKEDKGMYQCFVRNDQESAEASAELKL---GGRFDPPVIRQAFQEE 442
                   |..|  |.|.||...|:|.::...:|.....|:.|:|.:   .|::.|...:|....:
 Worm 13071 YLRKHDKGRYE--LHILSVDSTDEGKWKAVGKNAFGECESEAKLTVVIPDGQYAPSFGKQLSDVK 13133

  Fly   443 TMEPGPSVFLKCVAG--GNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDG 505
            ..|   |..||....  .||.|||:|..:..:|.::..::: |:...:|:.  .|.|...:|.|.
 Worm 13134 CSE---SDILKLEVNIQANPAPEINWFRNESEIEHSQHHRL-QFDDGSGNY--SLTIIDAYAEDS 13192

  Fly   506 GLYKCIAKSKVG-------------VAEHSAKLNVYGLPYIRQM--EKKAIVAGETLIVTCPVAG 555
            |.|||:||:|:|             :::.|.|::....|..|..  ..:.:..|..|.:.|.|:|
 Worm 13193 GEYKCVAKNKIGKAHTVCCVRIEELLSKRSKKIDGSKAPRFRMQLPTPREVPQGADLTLVCSVSG 13257

  Fly   556 YPIDSIVWERDNRALPINRKQKVFPNGTLIIENV-ERNSDQATYTCVAKNQEGYSARGS-LEVQV 618
            .|..:|.|.:|::.:.::.||....||...:..: .|:.||..|.|.|:|..|.:...| :|::.
 Worm 13258 TPHPNIKWTKDDKPIDMSNKQVRHENGVCTLHIIGARDDDQGRYVCEAENIHGVAQSFSVVEIKE 13322

  Fly   619 MV-LPQIVPFAYEDLINM----GDSIDLFCQIQKGDRPI-KVHWSFERSAGDYGFDQVQPQMRTN 677
            .| ...:.|...|.|:|.    |:.:.|.|.:.  .:|| .:.|          :......:..|
 Worm 13323 AVDKDHVRPKFLEPLVNCSTCEGNEMVLECCVT--GKPIPTITW----------YKDGLKLIIEN 13375

  Fly   678 RISEKT-----SMISIPSASPAHTGRDTCIASNKAG-----TTTYSVDL---------------- 716
            |:.:.|     |.::|.:......|..||.|.|..|     .|...||:                
 Worm 13376 RMLQYTDRKGVSRLNIMNVVMNDDGEYTCEAVNSLGKDFTHCTVKVVDMGLSKTRLTPVRSRSRS 13440

  Fly   717 ----------TVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKK 771
                      .:..||.......|....:|:...:|.:.||||.|.:.|... |....|.:.|:.
 Worm 13441 RSRSPSVVGGEIQRPPVVTRPLADATVTEGNRELLEVEVDGFPTPTIEWYHD-GKLVAESRTLRT 13504

  Fly   772 SDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAP---------PEFTEKLRN 827
            ..:.||  ..|.:....:.:.|.|:|:..|.:|:..:..|:: |:||         |.|.:||::
 Worm 13505 YFDGRV--AFLKIYEAHEEHNGQYVCKVSNKLGAVETRAIVV-VEAPDAAEHVTQMPTFVKKLQD 13566

  Fly   828 ---QTARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTER 889
               :||  ||.|...|::.......::|..|...|.....| |..|   |.....::|.|:....
 Worm 13567 VVLKTA--GETATFTCQSYANPAAQVVWLHNGKALQQTKSN-YKTR---LFDDNTATLVIENVTD 13625

  Fly   890 SDSALFTCVATNAFGSDDASINMIV------QEVPEMPY-------ALKVLDKSGRSVQLSWAQP 941
            .....:|.||.|.||....|..:.:      :....:||       .:.|::.:..|:|...   
 Worm 13626 ELCGTYTAVANNQFGDVHTSAQLTISGSEAKKIAASLPYFIIELKPKINVVEGATLSIQADL--- 13687

  Fly   942 YDGNSPLDRYIIEFKRSRASWSEIDRVIV--PGHTTEAQVQK--LSPATTYNIRIVAENAIGTSQ 1002
              ..||:...:  :.:..:...|.||:.:  .|...:..|:.  |....||.  |.|||..|..:
 Worm 13688 --NGSPIPEVV--WLKDNSELVESDRIQMKCDGVNYQLLVRDVGLEDEGTYT--ITAENEKGKIR 13746

  Fly  1003 SSEAVTIITAEEAPSGKPQNIKVE---------------------PVNQTTM------------- 1033
            .:..|::..::|... |.:..|||                     ...|.||             
 Worm 13747 QNTEVSVTKSKEVKE-KKEKKKVEKKDEGKKKPGRPGLPRPSGASKTEQVTMAFDAPSEGPADSY 13810

  Fly  1034 RVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQ 1098
            .|..:.|.:.||          ....:|                |...||::.|...|:|...:.
 Worm 13811 EVERRCPDQREW----------VSCGST----------------KSLELEIKGLTPNTEYIFRVA 13849

  Fly  1099 AFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVG-----WVSPPLESANGVIKTYK 1158
            ..||.|.|..||                    .|.|.:|..||     .:||..:........::
 Worm 13850 GKNKQGLGEWSE--------------------MTSTLKTASVGQAPQFTISPQSKIIANRDDEFE 13894

  Fly  1159 VVY------APSDEWYDET------KRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSV 1211
            :..      .||.:||.|.      ::....|.|:.::|:...:..|.|...|.....|....|.
 Worm 13895 IAVEFSGTPTPSVKWYKENLQIVPDEKIDVATTSTSSILNLKSQEENGTFNCLIENELGQASASC 13959

  Fly  1212 -------PIHCQTEPDVP----EAPTDVKAL----VMGNAAILVSWRPPAQPNGIITQYTVYSKA 1261
                   |...|:.||..    ..||..|||    ......|:::.|..::....:..:....:.
 Worm 13960 QVTIFNKPASLQSTPDHSLERNLVPTLQKALNNESAQAGQQIMLTCRISSRSESTVAWFKDDERI 14024

  Fly  1262 EGA-ETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASF 1325
            |.| ..|..:.|..::::...|.:.:....|...||......|.:.:.::..:.....|:..|:.
 Worm 14025 ESAGRYELSSDKKSNHKLVCHAVQSQDTGKYRCVVTNKYGYAESECNVAVEDVTKFIAPSFSATL 14089

  Fly  1326 DDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGS----LLIKSVNRQDAGD 1386
            .|: ||....:..:.|...|:|.||::|...|...|...|:|...|.:    |.|......|.|.
 Worm 14090 SDS-TAILGHNITLECKVEGSPAPEVSWTKDGERISTTRRIRQTQDENGNCKLSISKAESDDMGV 14153

  Fly  1387 YSCHAENSIAKDSITHKLIVLAPP--QSPHVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPE 1449
            |.|.|.:....|| |..::::|..  ...|:.::.|..:.                    |.||.
 Worm 14154 YVCSATSVAGVDS-TSSMVMIAKTTGTDSHLVIAQTADEK--------------------HEKPR 14197

  Fly  1450 FGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIE 1514
            |.....|.:.|:.          ..::.:.|.     ..||....:.....|::          .
 Worm 14198 FTRAPPSLIEVNE----------SGQFTLIAK-----AVGEPKPTVTWLKDGRE----------I 14237

  Fly  1515 VSSNSVSLHFKAWKDGGCPMSHFVVES--KKRDQIEWNQISN---NVKPDNNYVVLDLEPATWYN 1574
            :.:|.:..||..    |...||.:.|.  .|...|...:..|   .|..:...:|..::||..  
 Worm 14238 LRTNRIYHHFVT----GDGESHLIAECVVSKTSGIFSCKAENPNGTVIAETQVIVQRMKPANQ-- 14296

  Fly  1575 LRITAHNSAGFTVAEYDF-------ATLT--VTGGTIAPLD----DGSGHGNVHTRIRLPAWMPE 1626
               .|:.:..||:...|.       .||:  |||.....|:    |.|||     :|.|.:...:
 Worm 14297 ---LANVAPKFTIPLTDMGIVNGHPTTLSCNVTGSPEPTLEWIYIDDSGH-----KINLTSSTTD 14353

  Fly  1627 WLDLNF 1632
            |.:..|
 Worm 14354 WTECRF 14359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam1NP_001246162.1 Ig 38..130 CDD:299845
IG 57..133 CDD:214652
IG_like 267..343 CDD:214653 23/80 (29%)
Ig 269..340 CDD:143165 21/75 (28%)
IG_like 353..425 CDD:214653 22/106 (21%)
IGc2 361..413 CDD:197706 17/64 (27%)
I-set 433..527 CDD:254352 28/108 (26%)
IGc2 446..517 CDD:197706 23/72 (32%)
I-set 533..618 CDD:254352 24/88 (27%)
IGc2 544..607 CDD:197706 20/63 (32%)
Ig 641..714 CDD:143165 17/83 (20%)
IGc2 735..804 CDD:197706 18/68 (26%)
I-set 819..914 CDD:254352 26/97 (27%)
Ig 833..921 CDD:299845 20/93 (22%)
FN3 918..1011 CDD:238020 21/103 (20%)
FN3 1018..1116 CDD:238020 24/131 (18%)
FN3 1124..1217 CDD:238020 21/116 (18%)
FN3 1222..1312 CDD:238020 16/98 (16%)
Ig 1339..1406 CDD:299845 21/70 (30%)
FN3 1409..1499 CDD:238020 11/91 (12%)
FN3 1504..1584 CDD:238020 15/84 (18%)
Dscam_C 1890..2008 CDD:289151
ttn-1NP_001346715.1 IG 105..177 CDD:214652
I-set 205..285 CDD:333254
I-set 406..493 CDD:333254
I-set 821..914 CDD:333254
Ig 962..1032 CDD:319273
I-set 1135..1215 CDD:333254
I-set 1679..1767 CDD:254352
Ig 1789..>1845 CDD:319273
Atrophin-1 <1957..2285 CDD:331285
I-set 2381..2468 CDD:333254
I-set 2489..2578 CDD:333254
I-set 2631..2717 CDD:333254
I-set 2732..2815 CDD:333254
Ig 2848..2909 CDD:319273
I-set 2924..3007 CDD:333254
RNase_E_G <3161..3303 CDD:331378
RNase_E_G <3356..3556 CDD:331378
RNase_E_G <3506..3673 CDD:331378
RNase_E_G <3595..3803 CDD:331378
RNase_E_G <3722..3912 CDD:331378
RNase_E_G <3875..4073 CDD:331378
FtsK <4014..>4556 CDD:332908
RNase_E_G <4346..4567 CDD:331378
RNase_E_G <4525..4723 CDD:331378
RNase_E_G <4746..4936 CDD:331378
RNase_E_G <4858..5044 CDD:331378
FtsK <4960..>5541 CDD:332908
Neuromodulin_N <5525..6250 CDD:331332
Neuromodulin_N <6198..6681 CDD:331332
V-ATPase_G_2 <6559..>6683 CDD:330366
I-set 7448..7535 CDD:333254
FN3 7540..7630 CDD:238020
MDN1 <7687..8197 CDD:331582
Neuromodulin_N <7944..8780 CDD:331332
Ig 8886..>8935 CDD:325142
FN3 9052..9142 CDD:238020
Neuromodulin_N <9210..9875 CDD:331332
Neuromodulin_N <9583..10392 CDD:331332
IG_like 10597..>10662 CDD:214653
Ig 10711..10773 CDD:325142
FN3 10777..10870 CDD:238020
FN3 10883..10958 CDD:238020
FN3 10984..11070 CDD:238020
I-set 11077..11165 CDD:333254
IG 11179..11259 CDD:214652
I-set 11264..11350 CDD:333254
I-set 11368..11446 CDD:333254
FN3 11450..11543 CDD:238020
FN3 11565..11645 CDD:238020
I-set 11823..11903 CDD:333254
I-set 11918..11996 CDD:333254
FN3 12006..12097 CDD:238020
FN3 12131..12217 CDD:238020
I-set 12225..12313 CDD:333254
Ig 12337..12411 CDD:325142
FN3 12415..12503 CDD:238020
PKc_like 12566..12815 CDD:328722
I-set 12894..12985 CDD:254352 30/104 (29%)
I-set 13024..13114 CDD:333254 21/91 (23%)
I-set 13123..13206 CDD:254352 27/88 (31%)
Ig 13249..13314 CDD:319273 20/64 (31%)
I-set 13331..13421 CDD:254352 22/101 (22%)
I-set 13456..13545 CDD:254352 22/92 (24%)
I-set 13558..13650 CDD:254352 26/97 (27%)
I-set 13663..13753 CDD:254352 21/98 (21%)
FN3 13778..13864 CDD:238020 20/131 (15%)
Ig 13893..13963 CDD:325142 13/69 (19%)
I-set 13984..14074 CDD:333254 16/89 (18%)
I-set 14083..14168 CDD:254352 25/86 (29%)
Ig_3 14195..14275 CDD:316449 18/108 (17%)
Ig_3 14302..14384 CDD:316449 17/63 (27%)
I-set 14408..14498 CDD:333254
I-set 14634..14724 CDD:333254
IG_like 14754..14838 CDD:214653
I-set 14854..14943 CDD:333254
I-set 14969..15044 CDD:254352
Ig_3 15054..15132 CDD:316449
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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