Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_647547.2 | Gene: | Lrit1 / 246214 | RGDID: | 628607 | Length: | 623 | Species: | Rattus norvegicus |
Alignment Length: | 458 | Identity: | 83/458 - (18%) |
---|---|---|---|
Similarity: | 142/458 - (31%) | Gaps: | 166/458 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 736 GSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLH--------------VDN 786
Fly 787 IQKTNEGYYLCEAINGIGSG--LSAVIMISVQAPPEFT----------------EKLRNQTARRG 833
Fly 834 EPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEI----LSTGVMSSLSIKRTERSDSAL 894
Fly 895 FTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSR 959
Fly 960 ASWSEID--RVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQN 1022
Fly 1023 IKVEPVNQTTMRVTWKPPP---------------RTEWNGEILGYYVGYKLSNTNSSYVFETINF 1072
Fly 1073 ITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQT 1137
Fly 1138 IRV 1140 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 | |||
I-set | 533..618 | CDD:254352 | |||
IGc2 | 544..607 | CDD:197706 | |||
Ig | 641..714 | CDD:143165 | |||
IGc2 | 735..804 | CDD:197706 | 19/81 (23%) | ||
I-set | 819..914 | CDD:254352 | 15/114 (13%) | ||
Ig | 833..921 | CDD:299845 | 11/91 (12%) | ||
FN3 | 918..1011 | CDD:238020 | 24/94 (26%) | ||
FN3 | 1018..1116 | CDD:238020 | 15/112 (13%) | ||
FN3 | 1124..1217 | CDD:238020 | 4/17 (24%) | ||
FN3 | 1222..1312 | CDD:238020 | |||
Ig | 1339..1406 | CDD:299845 | |||
FN3 | 1409..1499 | CDD:238020 | |||
FN3 | 1504..1584 | CDD:238020 | |||
Dscam_C | 1890..2008 | CDD:289151 | |||
Lrit1 | NP_647547.2 | LRRNT | 23..61 | CDD:214470 | |
LRR 1 | 60..81 | ||||
LRR_8 | 63..143 | CDD:290566 | |||
leucine-rich repeat | 64..84 | CDD:275378 | |||
LRR 2 | 84..105 | ||||
leucine-rich repeat | 85..132 | CDD:275378 | |||
LRR 3 | 108..128 | ||||
LRR_8 | 131..>176 | CDD:290566 | |||
LRR_4 | 131..172 | CDD:289563 | |||
LRR 4 | 132..153 | ||||
leucine-rich repeat | 133..156 | CDD:275378 | |||
LRR 5 | 156..177 | ||||
leucine-rich repeat | 157..180 | CDD:275378 | |||
leucine-rich repeat | 181..205 | CDD:275378 | |||
TPKR_C2 | 201..>240 | CDD:301599 | |||
Ig | 257..345 | CDD:299845 | 21/91 (23%) | ||
IG_like | 267..345 | CDD:214653 | 21/91 (23%) | ||
FN3 | 431..501 | CDD:214495 | 20/75 (27%) | ||
LRR 6 | 525..548 | 3/22 (14%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |