Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936733.1 | Gene: | Ncam1 / 24586 | RGDID: | 67378 | Length: | 1136 | Species: | Rattus norvegicus |
Alignment Length: | 1451 | Identity: | 285/1451 - (19%) |
---|---|---|---|
Similarity: | 469/1451 - (32%) | Gaps: | 491/1451 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 FYPGTEYDGKYLVLPS-GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSVS 246
Fly 247 PQLSGNGNQEHITLTRVPKMGSVTLMCPAQAYPVPFFRWY----KFIEGTTRKQAVVLNDRVKQV 307
Fly 308 SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETV-LTVTAPLSAKIDPPTQTVDFGRPAVFTCQYT 371
Fly 372 GNPIKTVSW---------MKDGKAIGHSEPVLRIESVKKEDKGMYQC----FVRNDQESAEASAE 423
Fly 424 LKLGGRFDPPVI--RQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVT 486
Fly 487 VNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKK-AIVAGETLIVT 550
Fly 551 CPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLE 615
Fly 616 VQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRIS 680
Fly 681 EKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKA 745
Fly 746 DGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV----EEGTLHVDNIQKTNEGYYLCEAINGIGSG 806
Fly 807 LSAVIMISVQAPP----------------EFTEKLRNQTARRGEPAVLQCEAK----GEKPIGIL 851
Fly 852 W------NMNN----MRLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNAFGSD 906
Fly 907 DASINMIVQEV--------PEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRAS-W 962
Fly 963 SEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEP 1027
Fly 1028 VNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVY-- 1090
Fly 1091 ----TQYSVVIQAFNKIGAG--------------------PL----SEEEKQFTAEGTPSQPPSD 1127
Fly 1128 TACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYT 1192
Fly 1193 NYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPA----QPNGIIT 1253
Fly 1254 QYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQV 1318
Fly 1319 PAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGSLLIKSVNRQD 1383
Fly 1384 AGDYSCHAENSIAKDSITHKLIVLAPP--QSPHVTLSATTTDAL--------TVKLKPHEGDTAP 1438
Fly 1439 L---------------HGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGA 1488
Fly 1489 GEASDILNTRTKGQKPKLPEK 1509 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | 20/80 (25%) | ||
Ig | 269..340 | CDD:143165 | 18/74 (24%) | ||
IG_like | 353..425 | CDD:214653 | 21/84 (25%) | ||
IGc2 | 361..413 | CDD:197706 | 18/64 (28%) | ||
I-set | 433..527 | CDD:254352 | 34/95 (36%) | ||
IGc2 | 446..517 | CDD:197706 | 27/70 (39%) | ||
I-set | 533..618 | CDD:254352 | 17/85 (20%) | ||
IGc2 | 544..607 | CDD:197706 | 14/62 (23%) | ||
Ig | 641..714 | CDD:143165 | 10/72 (14%) | ||
IGc2 | 735..804 | CDD:197706 | 14/72 (19%) | ||
I-set | 819..914 | CDD:254352 | 22/124 (18%) | ||
Ig | 833..921 | CDD:299845 | 22/109 (20%) | ||
FN3 | 918..1011 | CDD:238020 | 22/93 (24%) | ||
FN3 | 1018..1116 | CDD:238020 | 16/127 (13%) | ||
FN3 | 1124..1217 | CDD:238020 | 15/92 (16%) | ||
FN3 | 1222..1312 | CDD:238020 | 14/93 (15%) | ||
Ig | 1339..1406 | CDD:299845 | 7/66 (11%) | ||
FN3 | 1409..1499 | CDD:238020 | 29/114 (25%) | ||
FN3 | 1504..1584 | CDD:238020 | 3/6 (50%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
Ncam1 | XP_038936733.1 | IgI_1_NCAM-1 | 20..116 | CDD:409451 | 30/159 (19%) |
Ig strand B | 37..41 | CDD:409451 | 1/3 (33%) | ||
Ig strand C | 51..55 | CDD:409451 | 1/28 (4%) | ||
Ig strand E | 79..83 | CDD:409451 | 2/3 (67%) | ||
Ig strand F | 93..98 | CDD:409451 | 2/4 (50%) | ||
Ig strand G | 107..110 | CDD:409451 | 0/2 (0%) | ||
IG_like | 124..190 | CDD:214653 | 19/65 (29%) | ||
Ig strand B | 135..139 | CDD:409353 | 2/3 (67%) | ||
Ig strand C | 148..152 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 172..176 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 186..191 | CDD:409353 | 2/4 (50%) | ||
IgI_3_NCAM-1 | 211..308 | CDD:143207 | 36/99 (36%) | ||
Ig strand B | 231..235 | CDD:143207 | 2/3 (67%) | ||
Ig strand C | 244..248 | CDD:143207 | 1/3 (33%) | ||
Ig strand E | 271..275 | CDD:143207 | 2/3 (67%) | ||
Ig strand F | 285..290 | CDD:143207 | 2/4 (50%) | ||
Ig strand G | 298..301 | CDD:143207 | 0/2 (0%) | ||
IgI_NCAM-1 | 307..413 | CDD:143277 | 31/189 (16%) | ||
Ig strand B | 326..330 | CDD:143277 | 0/3 (0%) | ||
Ig strand C | 339..343 | CDD:143277 | 2/3 (67%) | ||
Ig strand E | 379..383 | CDD:143277 | 1/3 (33%) | ||
Ig strand F | 393..398 | CDD:143277 | 1/4 (25%) | ||
Ig strand G | 406..409 | CDD:143277 | 0/2 (0%) | ||
Ig_3 | 422..494 | CDD:404760 | 14/76 (18%) | ||
Ig strand B | 433..437 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 446..450 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 473..477 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 487..492 | CDD:409353 | 2/4 (50%) | ||
FN3 | 509..606 | CDD:238020 | 23/127 (18%) | ||
fn3 | 619..701 | CDD:394996 | 19/83 (23%) | ||
Herpes_BLLF1 | <842..1133 | CDD:282904 | 64/341 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |