Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011248512.1 | Gene: | Ptpru / 19273 | MGIID: | 1321151 | Length: | 1473 | Species: | Mus musculus |
Alignment Length: | 1316 | Identity: | 260/1316 - (19%) |
---|---|---|---|
Similarity: | 455/1316 - (34%) | Gaps: | 372/1316 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 643 CQIQKGDRPIKVHWSFERSA-GDYGFDQVQ--PQMRTNRISEKTSMISIPSASPAHTGRDTCIAS 704
Fly 705 NKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTW-------------K 756
Fly 757 KAVGD-TPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQA--P 818
Fly 819 PEFTEKLRNQTARRGEPAVLQCEAKG----------EKPIGILWNMNNMRLDPKNDNRYTIREEI 873
Fly 874 LSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRS---VQ 935
Fly 936 LSWAQPYDGNSPLDRYIIEFKRSRASWSEIDRVIVPGHTTEAQVQK---LSPATTYNIRIVAENA 997
Fly 998 --IGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYV------ 1054
Fly 1055 ------GYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEK 1113
Fly 1114 QFTAEGTPSQPPSDTACTTLT----SQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDET--- 1171
Fly 1172 ---KRHYKKTASSD-TVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKA-- 1230
Fly 1231 ---------LVMGNAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQ------MSF 1280
Fly 1281 EATELEKNKPYEFW--VTAST-------TIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKED 1336
Fly 1337 AKMPCLAVG-------APQP-EITWK------IKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDY 1387
Fly 1388 SCHAEN-SIAKDSITHKLIVLAPPQSPHV--TLSATTTDALTVKLKPHEGDT---APLHGYTLHY 1446
Fly 1447 KPEFGEWETSEVSVDSQKHNIEGLL-------CGSRYQVYATGFNNIGAGEASDILNTRTKGQKP 1504
Fly 1505 KLPEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVESKKRDQIEWNQ---IS----NNVK----- 1557
Fly 1558 --PDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRL 1620
Fly 1621 PAWMPEWLDLNFMVPLIATVVVVAVGICVVCVALSRRRADDMRGGQKDVYYDV----VYNQTMGP 1681
Fly 1682 GA----TLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKRGRGGLRSNHST-WDPRRNPN 1741
Fly 1742 LYEELKAPPVPMHGNHYGHAHGNAECHYRHPGMEDEICPYATFHLLGFREEMDPTKAMNFQTFPH 1806
Fly 1807 QNGHAGPVPGH--AGT 1820 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 | |||
I-set | 533..618 | CDD:254352 | |||
IGc2 | 544..607 | CDD:197706 | |||
Ig | 641..714 | CDD:143165 | 14/73 (19%) | ||
IGc2 | 735..804 | CDD:197706 | 14/82 (17%) | ||
I-set | 819..914 | CDD:254352 | 22/104 (21%) | ||
Ig | 833..921 | CDD:299845 | 20/97 (21%) | ||
FN3 | 918..1011 | CDD:238020 | 25/100 (25%) | ||
FN3 | 1018..1116 | CDD:238020 | 19/109 (17%) | ||
FN3 | 1124..1217 | CDD:238020 | 26/103 (25%) | ||
FN3 | 1222..1312 | CDD:238020 | 26/115 (23%) | ||
Ig | 1339..1406 | CDD:299845 | 11/81 (14%) | ||
FN3 | 1409..1499 | CDD:238020 | 22/101 (22%) | ||
FN3 | 1504..1584 | CDD:238020 | 18/93 (19%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
Ptpru | XP_011248512.1 | MAM | 31..194 | CDD:214533 | 34/190 (18%) |
IG | 204..290 | CDD:214652 | 19/98 (19%) | ||
fn3 | 299..373 | CDD:365830 | 20/81 (25%) | ||
FN3 | 394..489 | CDD:238020 | 20/112 (18%) | ||
fn3 | 502..585 | CDD:365830 | 24/95 (25%) | ||
PTP_DSP_cys | 951..1174 | CDD:391942 | 54/270 (20%) | ||
R-PTPc-U-2 | 1259..1465 | CDD:350485 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |