Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006510118.1 | Gene: | Ncam1 / 17967 | MGIID: | 97281 | Length: | 1162 | Species: | Mus musculus |
Alignment Length: | 1486 | Identity: | 300/1486 - (20%) |
---|---|---|---|
Similarity: | 491/1486 - (33%) | Gaps: | 501/1486 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 FYPGTEYDGKYLVLPS-GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSVS 246
Fly 247 PQLSGNGNQEHITLTRVPKMGSVTLMCPAQAYPVPFFRWY----KFIEGTTRKQAVVLNDRVKQV 307
Fly 308 SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETV-LTVTAPLSAKIDPPTQTVDFGRPAVFTCQYT 371
Fly 372 GNPIKTVSW---------MKDGKAIGHSEPVLRIESVKKEDKGMYQC----FVRNDQESAEASAE 423
Fly 424 LKLGGRFDPPVI--RQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVT 486
Fly 487 VNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKK-AIVAGETLIVT 550
Fly 551 CPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLE 615
Fly 616 VQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRIS 680
Fly 681 EKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKA 745
Fly 746 DGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV----EEGTLHVDNIQKTNEGYYLCEAINGIGSG 806
Fly 807 LSAVIMISVQAPP----------------EFTEKLRNQTARRGEPAVLQCEAK----GEKPIGIL 851
Fly 852 W------NMNN----MRLDPKNDNRYTIREEILS---TGVMSSLSIKRTE---------RSDSAL 894
Fly 895 FTCVATNA-------FGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYI 952
Fly 953 IEFKRSRAS-WSEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAP 1016
Fly 1017 SGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHN 1081
Fly 1082 LELQNLRVYTQYSVVIQAFNKIG------------AGP------LSEEEKQFTAEGTPSQPPSDT 1128
Fly 1129 ACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTN 1193
Fly 1194 YTMQVLATTAGGDGVRSVPIHCQTEPD------VPEAPTDVKALVMGNAAILVSWRPPAQPNGII 1252
Fly 1253 TQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMP-SD 1316
Fly 1317 QVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGSLLIKSVNR 1381
Fly 1382 QDAGDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDAL--------------------T 1426
Fly 1427 VKLKPHEGDTAPL------------HGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVY 1479
Fly 1480 ATGFNNIGAGEASDILNT------------------RTKGQKPKLPEKPRFIEVSS 1517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | 20/80 (25%) | ||
Ig | 269..340 | CDD:143165 | 18/74 (24%) | ||
IG_like | 353..425 | CDD:214653 | 21/84 (25%) | ||
IGc2 | 361..413 | CDD:197706 | 18/64 (28%) | ||
I-set | 433..527 | CDD:254352 | 34/95 (36%) | ||
IGc2 | 446..517 | CDD:197706 | 27/70 (39%) | ||
I-set | 533..618 | CDD:254352 | 17/85 (20%) | ||
IGc2 | 544..607 | CDD:197706 | 14/62 (23%) | ||
Ig | 641..714 | CDD:143165 | 10/72 (14%) | ||
IGc2 | 735..804 | CDD:197706 | 14/72 (19%) | ||
I-set | 819..914 | CDD:254352 | 26/143 (18%) | ||
Ig | 833..921 | CDD:299845 | 24/120 (20%) | ||
FN3 | 918..1011 | CDD:238020 | 22/93 (24%) | ||
FN3 | 1018..1116 | CDD:238020 | 16/115 (14%) | ||
FN3 | 1124..1217 | CDD:238020 | 7/92 (8%) | ||
FN3 | 1222..1312 | CDD:238020 | 20/89 (22%) | ||
Ig | 1339..1406 | CDD:299845 | 12/66 (18%) | ||
FN3 | 1409..1499 | CDD:238020 | 30/139 (22%) | ||
FN3 | 1504..1584 | CDD:238020 | 5/14 (36%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
Ncam1 | XP_006510118.1 | Ig1_NCAM-1 | 20..115 | CDD:143273 | 30/158 (19%) |
IG | 124..190 | CDD:214652 | 19/65 (29%) | ||
Ig3_NCAM-1_like | 211..308 | CDD:143207 | 36/99 (36%) | ||
Ig_NCAM-1 | 307..413 | CDD:143277 | 31/189 (16%) | ||
Ig_3 | 417..494 | CDD:372822 | 15/82 (18%) | ||
FN3 | 509..606 | CDD:238020 | 22/103 (21%) | ||
fn3 | 649..731 | CDD:365830 | 19/83 (23%) | ||
PHA03247 | <905..1140 | CDD:223021 | 55/253 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |