Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_724781.1 | Gene: | CSF3R / 1441 | HGNCID: | 2439 | Length: | 863 | Species: | Homo sapiens |
Alignment Length: | 939 | Identity: | 169/939 - (17%) |
---|---|---|---|
Similarity: | 306/939 - (32%) | Gaps: | 324/939 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 632 LINMGDSIDLFCQIQKG----DRPIKVHWSFERSAGDYGFDQVQPQMRTNRISEKT--SMISIPS 690
Fly 691 ASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTW 755
Fly 756 KKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQK----------------TNEGYYLCEAINGIG 804
Fly 805 SGLSAVIMISVQ-------------------APPE----------------FTEK--LRNQTARR 832
Fly 833 GEPA----------VLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILS---TGVMS---- 880
Fly 881 SLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQ-PYDG 944
Fly 945 NS-PLDRYIIEFKRSRASWSEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAV- 1007
Fly 1008 -----TIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKL-----SNTN 1062
Fly 1063 SSYVFETINFITEEGKEHNLEL-QNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPS 1126
Fly 1127 DTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHYK---KTASSDTVLHGL 1188
Fly 1189 KKYTNYTMQVLATTAGGDGVRSV-----------PIH---------------CQTE--------- 1218
Fly 1219 ----PDVPEAPTDVKALVMGNAAILVSWRP--------PAQPNGIITQYTVYSKAEGAETETKTQ 1271
Fly 1272 KVPH--YQMSFE-----------ATELEKNK----PYEFWVTAST-----------------TIG 1302
Fly 1303 EGQQSKS----------IVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQP---EITWK 1354
Fly 1355 IKGVEFSANDRMRVLPDGSLLIKSVNRQD 1383 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 | |||
I-set | 533..618 | CDD:254352 | |||
IGc2 | 544..607 | CDD:197706 | |||
Ig | 641..714 | CDD:143165 | 14/78 (18%) | ||
IGc2 | 735..804 | CDD:197706 | 13/84 (15%) | ||
I-set | 819..914 | CDD:254352 | 21/129 (16%) | ||
Ig | 833..921 | CDD:299845 | 16/104 (15%) | ||
FN3 | 918..1011 | CDD:238020 | 22/100 (22%) | ||
FN3 | 1018..1116 | CDD:238020 | 21/103 (20%) | ||
FN3 | 1124..1217 | CDD:238020 | 19/121 (16%) | ||
FN3 | 1222..1312 | CDD:238020 | 23/141 (16%) | ||
Ig | 1339..1406 | CDD:299845 | 13/48 (27%) | ||
FN3 | 1409..1499 | CDD:238020 | |||
FN3 | 1504..1584 | CDD:238020 | |||
Dscam_C | 1890..2008 | CDD:289151 | |||
CSF3R | NP_724781.1 | Lep_receptor_Ig | 24..110 | CDD:283889 | 17/82 (21%) |
FN3 | 249..329 | CDD:238020 | 17/96 (18%) | ||
FN3 | 345..423 | CDD:238020 | 21/83 (25%) | ||
fn3 | 430..514 | CDD:278470 | 20/104 (19%) | ||
FN3 | 527..607 | CDD:214495 | 17/86 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |