DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dscam1 and Dscam2

DIOPT Version :10

Sequence 1:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster
Sequence 2:XP_061502594.1 Gene:Dscam2 / 1275709 VectorBaseID:AGAMI1_003237 Length:2000 Species:Anopheles gambiae


Alignment Length:2064 Identity:713/2064 - (34%)
Similarity:1067/2064 - (51%) Gaps:244/2064 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MPNERLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNP 67
            |.|.|:. ||||..|..|: |..|.|.   |:..:||.|:.||.:|::||||:|..::|.|||:|
Mosquito     7 MWNNRVS-LMLFFFVLWIS-GELTAAF---DSHLRGPSFVMEPPSRLEFSNSSGGWLDCSASGSP 66

  Fly    68 MPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVH 132
            .|.|.|:..|||:||||.|:|::..:|.||..||.|..|||::|:.:|.|:|.|..|.:|||||.
Mosquito    67 QPSIDWLSVDGTSVGDVGGVRRVLRNGTLVLLPFPATAYRQDIHSTIYRCVASNTVGRVISRDVQ 131

  Fly   133 VRAVVSQHYEEDIHKAFVIRGNSAILKCDIPSFVADFVNVISWHSDEKENFYPGTEYDGKYLVLP 197
            |||||:|.|:.|:......||.:|||:|.:|:||.:.|.|:||..:.....||..:.||||.:||
Mosquito   132 VRAVVAQAYKVDVEVLAASRGCTAILRCVVPNFVKELVRVVSWVQEPAFYIYPSLQGDGKYHLLP 196

  Fly   198 SGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSVSPQLSGNGNQEHITLTR 262
            :|||.|..:...|.|.||:|||.|:||.:. :::...::.:.|..|.|||.:     .||.:...
Mosquito   197 TGELLIHNLEYNDRYPSYRCRTMHKLTRQV-VTSNSAKIRMNEQRGIVSPSV-----VEHTSHVA 255

  Fly   263 VPKMGSVTLMCPAQAYPVPFFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCV 327
            |.:.....|:|.||..|.|.:|||  .........|....|::.:...|.|:....||.|.|.|.
Mosquito   256 VSQDEGAVLLCVAQGCPSPEYRWY--THNGPEPIPVSSGPRIRLLGPVLAIEAVTAEDGGVYKCS 318

  Fly   328 VNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKT----VSWMKDGKAI- 387
            .:|:.|..|.:..|||:.|:..:|.|...:|..|..|.|.|..|.|.:..    ::|.|||:.: 
Mosquito   319 ASNAGGEASADLRLTVSTPIHVEITPNVLSVHMGGTAEFRCLVTANGMSAGPQHITWFKDGRQLP 383

  Fly   388 --GHSEPVLRIESVKKEDKGMYQCFVRNDQ-ESAEASAELKLGGRFDPPVIRQAFQEETMEPGPS 449
              |.....|::..|.:||||||||.||..: :|.:|||||:||..  ||.:..:|.|:|::|||:
Mosquito   384 SSGRVGDTLQVTGVTREDKGMYQCVVRRQEGDSFQASAELQLGDA--PPSLVYSFIEQTLQPGPA 446

  Fly   450 VFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKS 514
            |.|||.|.|||||:|:|.|||..:..|.|:.:||||||:|||:|::||:.|...|||.|.|.|::
Mosquito   447 VSLKCSAQGNPTPQIAWTLDGFPLPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCAAEN 511

  Fly   515 KVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVF 579
            :.|...|||:||:|||||||.:.|...|||.||.:.||||||||:.|.|||..|.||.:.:|||.
Mosquito   512 RAGKTSHSARLNIYGLPYIRLIPKVTAVAGHTLYLKCPVAGYPIEEIHWERGGRELPEDMRQKVQ 576

  Fly   580 PNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAYEDL-INMGDSIDLFC 643
            .:|||.|:.|:::.|...|||.|:|::|:|||.|.||.|:|.|::.||....| :|:||...:.|
Mosquito   577 SDGTLEIKEVQKSLDSGVYTCWARNKQGHSARRSGEVAVIVPPKLNPFHSSILSLNVGDRASITC 641

  Fly   644 QIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRISEKTSMISIPSASPAHTGRDTCIASNKAG 708
            .:.|||.|:.:.|   |..| ...|..| :|...::.:..|::.|.:.:..|||..:|:..|.|.
Mosquito   642 SVIKGDIPLTITW---RKDG-RPIDPTQ-RMSVTQVDQYNSILLIENLTADHTGNYSCVVRNTAA 701

  Fly   709 TTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSD 773
            .|.....|.|||||||::||||.:..:.....:.|:|.|.|.|.:.||||.|...|:|:::::..
Mosquito   702 ETEGHQSLLVNVPPRWVVEPTDVSVERNRHIMLHCQAQGVPVPTILWKKATGSKSGDYEEVRERP 766

  Fly   774 NIR-VEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLRNQTARRGEPAV 837
            ..: :..|:|.:.::::..||:|||:|.||||:|:..||.:.|.:.|.|..:.:..|.::|:.|:
Mosquito   767 YTKLLANGSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFAGQSKMVTVKKGDTAI 831

  Fly   838 LQCEAKGEKPIGILWNMNNM-RLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATN 901
            :|||.||:|||.::|..|.. .|:|..:.|.:|:::....|:.:.:.|...:.|||..:.|.|:|
Mosquito   832 MQCEVKGDKPINVVWLRNGKHELNPSTNYRVSIKQDATPEGISAEVQISNVDSSDSGAYFCQASN 896

  Fly   902 AFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGN-SPLDRYIIEFKRSRASWSEI 965
            .:|.|...:.:.|||.|:.|.:|:....|.|.|.|.| ||..|: :.:.:||:|::.....|..|
Mosquito   897 LYGRDQQLVQLQVQEPPQPPSSLEAATVSSRVVNLKW-QPRGGDAAEVSKYIVEYREIDRQWQYI 960

  Fly   966 DRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQ 1030
            :....|.::|  .::.|.|||.|..||:||...|.|..|:.:.|.|..:.|:|.|.|:...|::.
Mosquito   961 EISDPPAYST--IIENLKPATNYVFRIIAEGPAGRSSPSQELFIKTDPQRPAGPPLNLGARPISS 1023

  Fly  1031 TTMRVTWKPPPRTEWNGEILGYYVGYK-LSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYS 1094
            |.:.:||.||.....:|||.||.:||: :..|.:||.|.:|:...|:| ...|.|.||..||:|:
Mosquito  1024 TEILITWMPPSYELRHGEIQGYNIGYRSMHATTNSYNFTSISGDGEDG-TGELLLGNLAKYTRYT 1087

  Fly  1095 VVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKV 1159
            :|.||||::|.|||||.....|.|..||:||.|..|...:|.:|:|.|..|.....||:::.|||
Mosquito  1088 IVAQAFNQVGPGPLSEPVTAQTMEDVPSKPPEDIRCMAQSSTSIQVSWQPPQAHHTNGLLQGYKV 1152

  Fly  1160 VY-APSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPE 1223
            .| ..:::.....:...:||.|....|..|:|::||::||||.|..||||.|.|..|.|:.|.||
Mosquito  1153 FYECATEDAISSGEMETRKTTSLTIHLSNLRKFSNYSIQVLAYTRMGDGVISTPSFCHTDEDAPE 1217

  Fly  1224 APTDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQK--VPHYQMSFEATELE 1286
            ||.|:|..:...:::.|||.||..||||||:|.:|.:|.....|....|  :..:|..|||.:|:
Mosquito  1218 APADIKIAISSPSSLYVSWLPPRDPNGIITKYNLYMRAVNGREELNNDKRNLQAHQHHFEAKQLQ 1282

  Fly  1287 KNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEI 1351
            .:..|:|||:|||.:|||:.|:.:..:.|::|||||.||.......:|..|.:.|:|||.|:.| 
Mosquito  1283 SHTEYQFWVSASTRVGEGKSSRVVSQLTSNRVPAKIVSFGGLTIRPWKSSASLNCMAVGQPRRE- 1346

  Fly  1352 TWKIKG---VEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSP 1413
             | .||   :.......:::|..|.:::..:...|.|:|:|..:|.|..|.:||.|:|..||..|
Mosquito  1347 -W-FKGDTLLRPGTQHNIQLLDSGEIIVTMLQTSDTGNYTCQVDNGIGTDRLTHNLLVQVPPGPP 1409

  Fly  1414 HVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQV 1478
            .:.:::.|:.::.:..|......||:..::|||:...|..|..::|..:..|:::||.|||.|||
Mosquito  1410 VLYVTSATSSSILLHWKIGSTGNAPITAFSLHYRRVHGNLEEMQLSRHASSHDLKGLFCGSTYQV 1474

  Fly  1479 YATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVE--- 1540
            |....|.||:..||..||.:|:||.|.:|.....|..:|.||.|....|.|.|||:.:||::   
Mosquito  1475 YLVAHNKIGSSSASTTLNVKTQGQPPGIPPDSVLIAPNSTSVVLRLNGWPDNGCPIMYFVLQYRS 1539

  Fly  1541 -SKKRDQIEWNQISNNVKPDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAP 1604
             |...|. ||:.:||.:||...:.:..|.|:|.|.|::.|||.||.|.|||.|.|||..|....|
Mosquito  1540 VSTGLDD-EWHLVSNALKPQRRFTLSGLLPSTMYRLKMEAHNVAGSTNAEYTFWTLTKDGDPPPP 1603

  Fly  1605 LDDGSGHGN--VHTRIRLPAWMPEWLDLNFMVPLIATV--VVVAVGICVVCVAL---SRRRADDM 1662
            .....||.:  .:..|:|            ::|:|.|:  .::.:...|||...   .|:|.|.|
Mosquito  1604 ELVQRGHRSQIFYNNIQL------------LIPIIITITATIICIAFTVVCYKYRQRGRQRKDTM 1656

  Fly  1663 RG-----GQKDVYYDVVYNQTMGPGATLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKR 1722
            ..     .|:|.||..::...:..|                                   |:|  
Mosquito  1657 ESQQTTDAQRDRYYATIHKVALQAG-----------------------------------DKI-- 1684

  Fly  1723 GRGGLRSNHSTWDPRRNPNLYEELKAPPVPMHGNHYGHAHGNAECHYRHPGMEDEICPYATFHLL 1787
                                                             |...::|.|||||.| 
Mosquito  1685 -------------------------------------------------PETSEDISPYATFQL- 1699

  Fly  1788 GFREEMDPTKAMNFQTFPHQNGHAGPVPGHAGTML-----------------PPGHPGHVHSRS- 1834
                    ::|..... ||   |:||    |.|:|                 ||.....:|::| 
Mosquito  1700 --------SEASTLAQ-PH---HSGP----ANTLLHSFMYHERAMTEGCASPPPAAVLRLHNQSP 1748

  Fly  1835 --GSQSMPRANRYQRKNSQGGQSSIYTP--------------------APEYDDPANCAEEDQYR 1877
              ...|.....|:.||.....:.|...|                    :.:.|..|....:..|.
Mosquito  1749 YYNINSSKGRRRHSRKTEPESEESDSDPDQLTSSRTESSNQLDAKMKHSKDLDVAAGGPGDHGYN 1813

  Fly  1878 RYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDH--YGSRGSMGRRSI---- 1936
            ....:.|..|.:|.  |.:....::.:|..:|......|...|...|  |..||:|  ||:    
Mosquito  1814 PNHYMRSIPGLIYH--GTQSSTSSDLSPMSEQKSLPRRGRSSQSQTHHIYMPRGTM--RSLLTPL 1874

  Fly  1937 ----GSARNPGNGSPEPPPPPPRNHDMSNSSFNDSKESNEISEAECDRD 1981
                |||  ||.|        |..|.:...  ..:.:..|:||||||.|
Mosquito  1875 HLPDGSA--PGGG--------PLFHQVPIE--GGTPDRIELSEAECDID 1911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam1NP_001246162.1 IgI_1_Dscam 38..136 CDD:409547 50/97 (52%)
Ig strand A 39..42 CDD:409547 1/2 (50%)
Ig strand A' 48..52 CDD:409547 1/3 (33%)
Ig strand B 55..64 CDD:409547 2/8 (25%)
Ig strand C 70..76 CDD:409547 2/5 (40%)
Ig strand C' 78..81 CDD:409547 2/2 (100%)
Ig strand D 87..90 CDD:409547 1/2 (50%)
Ig strand E 95..100 CDD:409547 2/4 (50%)
Ig strand F 113..121 CDD:409547 3/7 (43%)
Ig strand G 124..136 CDD:409547 8/11 (73%)
IgI_2_Dscam 246..343 CDD:409545 27/96 (28%)
Ig strand A 247..250 CDD:409545 1/2 (50%)
Ig strand A' 260..264 CDD:409545 0/3 (0%)
Ig strand B 267..274 CDD:409545 1/6 (17%)
Ig strand C 282..288 CDD:409545 3/5 (60%)
Ig strand C' 294..297 CDD:409545 0/2 (0%)
Ig strand D 303..307 CDD:409545 1/3 (33%)
Ig strand E 309..315 CDD:409545 2/5 (40%)
Ig strand F 322..330 CDD:409545 3/7 (43%)
Ig strand G 333..343 CDD:409545 3/9 (33%)
IgC2_3_Dscam 346..426 CDD:409549 33/87 (38%)
Ig strand A 347..352 CDD:409549 0/4 (0%)
Ig strand A' 355..359 CDD:409549 0/3 (0%)
Ig strand B 362..372 CDD:409549 3/9 (33%)
Ig strand C 377..383 CDD:409549 1/9 (11%)
Ig strand C' 384..387 CDD:409549 1/2 (50%)
Ig strand E 392..398 CDD:409549 1/5 (20%)
Ig strand F 405..413 CDD:409549 6/7 (86%)
Ig strand G 416..426 CDD:409549 6/9 (67%)
IgI_4_Dscam 432..527 CDD:409548 49/94 (52%)
Ig strand A 432..435 CDD:409548 2/2 (100%)
Ig strand A' 441..445 CDD:409548 2/3 (67%)
Ig strand B 448..457 CDD:409548 5/8 (63%)
Ig strand C 462..468 CDD:409548 3/5 (60%)
Ig strand C' 470..473 CDD:409548 1/2 (50%)
Ig strand D 478..486 CDD:409548 4/7 (57%)
Ig strand E 490..499 CDD:409548 5/8 (63%)
Ig strand F 506..514 CDD:409548 4/7 (57%)
Ig strand G 517..527 CDD:409548 5/9 (56%)
IgI_5_Dscam 531..618 CDD:409550 46/86 (53%)
Ig strand A 531..533 CDD:409550 1/1 (100%)
Ig strand A' 538..542 CDD:409550 1/3 (33%)
Ig strand B 545..552 CDD:409550 2/6 (33%)
Ig strand C 559..565 CDD:409550 2/5 (40%)
Ig strand C' 566..568 CDD:409550 0/1 (0%)
Ig strand D 575..579 CDD:409550 2/3 (67%)
Ig strand E 582..588 CDD:409550 4/5 (80%)
Ig strand F 596..604 CDD:409550 4/7 (57%)
Ig strand G 608..618 CDD:409550 6/9 (67%)
Ig 621..718 CDD:472250 28/97 (29%)
Ig strand B 639..643 CDD:409353 0/3 (0%)
Ig strand C 653..657 CDD:409353 0/3 (0%)
Ig strand E 684..688 CDD:409353 1/3 (33%)
Ig strand F 698..703 CDD:409353 1/4 (25%)
Ig strand G 711..714 CDD:409353 0/2 (0%)
IgI_7_Dscam 721..815 CDD:409546 35/94 (37%)
Ig strand A 721..725 CDD:409546 3/3 (100%)
Ig strand A' 730..734 CDD:409546 1/3 (33%)
Ig strand B 737..746 CDD:409546 1/8 (13%)
Ig strand C 752..758 CDD:409546 2/5 (40%)
Ig strand C' 764..767 CDD:409546 1/2 (50%)
Ig strand D 775..778 CDD:409546 0/3 (0%)
Ig strand E 780..786 CDD:409546 2/5 (40%)
Ig strand F 793..801 CDD:409546 5/7 (71%)
Ig strand G 806..815 CDD:409546 3/8 (38%)
Ig 818..916 CDD:472250 30/98 (31%)
Ig strand B 836..840 CDD:409353 1/3 (33%)
Ig strand C 849..853 CDD:409353 0/3 (0%)
Ig strand E 880..884 CDD:409353 0/3 (0%)
Ig strand F 894..899 CDD:409353 1/4 (25%)
FN3 <899..1212 CDD:442628 118/315 (37%)
Ig strand G 907..910 CDD:409353 0/2 (0%)
FN3 1222..1312 CDD:238020 38/91 (42%)
Ig <1339..1406 CDD:472250 21/69 (30%)
Ig strand C 1350..1354 CDD:409358 1/3 (33%)
Ig strand E 1372..1376 CDD:409358 1/3 (33%)
Ig strand F 1386..1391 CDD:409358 2/4 (50%)
Ig strand G 1399..1402 CDD:409358 0/2 (0%)
FN3 1409..1499 CDD:238020 30/89 (34%)
FN3 1504..1584 CDD:238020 30/83 (36%)
Dscam_C 1893..2008 CDD:463546 28/99 (28%)
Dscam2XP_061502594.1 None

Return to query results.
Submit another query.