DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam1 and Dscam1

DIOPT Version :10

Sequence 1:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster
Sequence 2:XP_061517328.1 Gene:Dscam1 / 1271065 VectorBaseID:AGAMI1_001175 Length:2036 Species:Anopheles gambiae


Alignment Length:2063 Identity:1546/2063 - (74%)
Similarity:1736/2063 - (84%) Gaps:81/2063 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AVALIA------CGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWI 74
            |.||:.      |.:....|...| |.|||||||||||||||||||||.:||.|:|||.||:|||
Mosquito    15 ATALLCLLSGFNCLNGVAGAGKVD-DSKGPVFLKEPTNRIDFSNSTGAVVECSATGNPPPEMIWI 78

  Fly    75 RSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVSQ 139
            ||||||||||||||||..:|.||||||||||||||||||||||:|:|||||:|||||:|||||.|
Mosquito    79 RSDGTAVGDVPGLRQILPNGNLVFPPFRAEDYRQEVHAQVYACMAKNQFGSVISRDVNVRAVVQQ 143

  Fly   140 HYEEDIHKAFVIRGNSAILKCDIPSFVADFVNVISWHSDEKENFY----------PGTEYDGKYL 194
            :|:.:::.|:|||||||||||.|||||||||.|:|| :|:..|.|          ...|.||||:
Mosquito   144 YYDSEVNNAYVIRGNSAILKCSIPSFVADFVAVVSW-NDDAGNVYQQLDNRTVQSAELEVDGKYM 207

  Fly   195 VLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSVSPQLSGNGNQEHIT 259
            |||||||||||||||||||||||||||||||||||||||||||||||:|.|||:|.....   |.
Mosquito   208 VLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPLGRVSPKLDSTSK---IV 269

  Fly   260 LTRVPKMGSVTLMCPAQAYPVPFFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKY 324
            ...|.:..::.|:|.||.||:..|||||:||||.:|:||||:|||||||||||||||||:|||||
Mosquito   270 TAEVRRSNTIALLCSAQGYPIAVFRWYKYIEGTQQKKAVVLDDRVKQVSGTLIIKDAVVDDSGKY 334

  Fly   325 LCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH 389
            |||||||||||||||||||||||:|||:|.||||||||||||||:::||||||||||||||::||
Mosquito   335 LCVVNNSVGGESVETVLTVTAPLAAKIEPRTQTVDFGRPAVFTCKFSGNPIKTVSWMKDGKSLGH 399

  Fly   390 SEPVLRIESVKKEDKGMYQCFVRNDQESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKC 454
            |:.||||||||||||||||||:|||||||:||||||||||||||:||:||.|||..|||||||||
Mosquito   400 SDAVLRIESVKKEDKGMYQCFIRNDQESAQASAELKLGGRFDPPIIREAFPEETRHPGPSVFLKC 464

  Fly   455 VAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVA 519
            |||||||||||||||||||.|::||||||||||||||||:|||||:|:||||||||:|.||||||
Mosquito   465 VAGGNPTPEISWELDGKKITNSERYQVGQYVTVNGDVVSHLNITSIHSNDGGLYKCMASSKVGVA 529

  Fly   520 EHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTL 584
            |||||||||||||:|.|||||||||||||||||||||||:|||||||||.|||||||||||||||
Mosquito   530 EHSAKLNVYGLPYVRTMEKKAIVAGETLIVTCPVAGYPIESIVWERDNRQLPINRKQKVFPNGTL 594

  Fly   585 IIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAY-EDLINMGDSIDLFCQIQKG 648
            ||||||||||||||||||||.|||:|||:|||||||.|:|:||:: .|.:|.|:|..:.|.:..|
Mosquito   595 IIENVERNSDQATYTCVAKNSEGYTARGTLEVQVMVPPKILPFSFGADPMNYGESASIQCSVISG 659

  Fly   649 DRPIKVHWSFERSA-----GDYGFDQVQPQMRTNRISEKTSMISIPSASPAHTGRDTCIASNKAG 708
            |.|:.:.|.:|..|     ..:|...:       ...::...:||...:.:|.|..||.|:|.||
Mosquito   660 DFPMTIDWLYEGRAISTIDSLHGITAL-------AFGKRAKALSIDGIAGSHAGNYTCRATNAAG 717

  Fly   709 TTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSD 773
            ...::..|.||||||||||||||||||||:|||||||||||||||||||||||||||||||:.:|
Mosquito   718 VAEHTEQLIVNVPPRWILEPTDKAFAQGSNAKVECKADGFPKPQVTWKKAVGDTPGEYKDLRSND 782

  Fly   774 -NIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLRNQTARRGEPAV 837
             :||||||:|.:.||||:||||||||||||||||||||.:|:|||||||.|||||||||||||:|
Mosquito   783 SSIRVEEGSLFIQNIQKSNEGYYLCEAINGIGSGLSAVTLITVQAPPEFVEKLRNQTARRGEPSV 847

  Fly   838 LQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNA 902
            |||||||||||||||||||:|||||:|||||||||||..||.||||||||||||||||||:||||
Mosquito   848 LQCEAKGEKPIGILWNMNNIRLDPKSDNRYTIREEILPNGVTSSLSIKRTERSDSALFTCMATNA 912

  Fly   903 FGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASW-SEID 966
            |||||.|||||:||||||||||||||||||:||||||:||||||||.||||||||||.|| ::||
Mosquito   913 FGSDDTSINMIIQEVPEMPYALKVLDKSGRTVQLSWAKPYDGNSPLKRYIIEFKRSRGSWENDID 977

  Fly   967 RVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQT 1031
            ||||||.|.|||||||||||||||||||||.||.|..|:.|||||||||||||||.||||.:||.
Mosquito   978 RVIVPGDTNEAQVQKLSPATTYNIRIVAENEIGVSDPSDVVTIITAEEAPSGKPQAIKVEAINQA 1042

  Fly  1032 TMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITE--EGKEHNLELQNLRVYTQYS 1094
            |:||:||.|||.||||:|||||||||.::.|:.||:||:|:..|  |||||:||:.||:.|||||
Mosquito  1043 TLRVSWKAPPRAEWNGDILGYYVGYKQTSLNTLYVYETVNYSPEGGEGKEHSLEINNLKTYTQYS 1107

  Fly  1095 VVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKV 1159
            :|||||||:||||:|:||||:||||||.||||||.|||||||||||.||||||||||||||.|||
Mosquito  1108 IVIQAFNKVGAGPMSDEEKQYTAEGTPDQPPSDTMCTTLTSQTIRVSWVSPPLESANGVIKGYKV 1172

  Fly  1160 VYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEA 1224
            ||||||.|.::..:.||||||||||||||||||||||||||||:|||||||.|||||||.|||||
Mosquito  1173 VYAPSDLWNNDKNKDYKKTASSDTVLHGLKKYTNYTMQVLATTSGGDGVRSAPIHCQTEQDVPEA 1237

  Fly  1225 PTDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNK 1289
            ||.||||||...:|.|||:|||||||:|.|||||.|:  .:.|.|:.|||.||:::||:.||||:
Mosquito  1238 PTAVKALVMSEGSIFVSWQPPAQPNGLILQYTVYIKS--GDQEPKSFKVPSYQINYEASGLEKNQ 1300

  Fly  1290 PYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWK 1354
            .|||||||||||||||.||::.|||||:||||||||||.||||||||||:||||||:|.||||||
Mosquito  1301 KYEFWVTASTTIGEGQSSKTLSAMPSDKVPAKIASFDDKFTATFKEDAKLPCLAVGSPAPEITWK 1365

  Fly  1355 IKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSA 1419
            ||||||..|:|:|.||:|||.||.|.|||||||:|.||||||||||||:||||||||||.:||:|
Mosquito  1366 IKGVEFVPNERIRQLPEGSLFIKDVIRQDAGDYTCTAENSIAKDSITHRLIVLAPPQSPQLTLTA 1430

  Fly  1420 TTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFN 1484
            ||||:|:|||||||.|||||.|||||||||||||||.:|::::.|:.||.|.||||||||||.:|
Mosquito  1431 TTTDSLSVKLKPHESDTAPLQGYTLHYKPEFGEWETIDVALEAPKYTIEKLYCGSRYQVYATAYN 1495

  Fly  1485 NIGAGEASDILNTRTKGQKPKLPEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVESKKRDQIEW 1549
            :|||||.||||||||||.||.||||.|||||||||::||..|||||||.|||||||.||:|||:|
Mosquito  1496 SIGAGEPSDILNTRTKGSKPLLPEKSRFIEVSSNSITLHLPAWKDGGCRMSHFVVEHKKKDQIDW 1560

  Fly  1550 NQISNNVKPDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNV 1614
            |||||||||..|:||||||||||||||:||||:||||||||:|||||:||||:||:     .|:|
Mosquito  1561 NQISNNVKPGGNFVVLDLEPATWYNLRVTAHNNAGFTVAEYEFATLTITGGTVAPI-----FGSV 1620

  Fly  1615 HTRIRLPAWMPEWLDLNFMVPLIATVVVVAVGICVVCVALSRRRADDMRGGQKDVYYDVVYNQTM 1679
            ......|.|:|.|:|||.||||||||:|||||:.|:|||:||||.||.|.|.|||||||||||:|
Mosquito  1621 QPGTIYPPWIPHWIDLNVMVPLIATVIVVAVGVLVICVAISRRRDDDPRCGPKDVYYDVVYNQSM 1685

  Fly  1680 GP--GATLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKRG-----RGGLRSNHSTWDPR 1737
            ||  .|||||||||:|||||||||||||||||||||||||||:|||     ...::|||:|||||
Mosquito  1686 GPAGAATLDKRRPDIRDELGYIAPPNRKLPPVPGSNYNTCDRVKRGTVISHNPSIKSNHTTWDPR 1750

  Fly  1738 RNPNLYEELK--APPVPMHGNHYGHAHGNAECHYRHPGMEDEICPYATFHLLGFREEMDPTKAMN 1800
            |  .||||||  .||:|...||      ...|:    ||||||||||||||||||||||||||||
Mosquito  1751 R--PLYEELKKAPPPLPRRFNH------PPACY----GMEDEICPYATFHLLGFREEMDPTKAMN 1803

  Fly  1801 FQTFPHQNGHAGPVPGHAGTM---LPPGHPGHVHSRSGSQSMPRANRYQRKNSQGGQSSIYTPAP 1862
            |||||||||..|  |||.|||   :....|.|||||||||||||.|||.||||||||||||||||
Mosquito  1804 FQTFPHQNGMGG--PGHMGTMGSSMAMQVPSHVHSRSGSQSMPRQNRYARKNSQGGQSSIYTPAP 1866

  Fly  1863 EYDDPANCAEEDQYRRYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDHYGS 1927
            |||||||||||||||||||:||||||||.|||||||||||||||:|||||||||.||.||:||||
Mosquito  1867 EYDDPANCAEEDQYRRYTRINSQGGSLYCGPGPEYDDPANCAPEDDQYGSQYGGNYGTPYEHYGS 1931

  Fly  1928 RGSMGRRSIGSARNPGNGSPEPPPPPPRNHDMSNSSFNDSKESNEISEAECDRDHGPRGNYG-AV 1991
            |||:||||:        ||||||||||||||.||||||||||||||||||||||:||||||| ..
Mosquito  1932 RGSVGRRSV--------GSPEPPPPPPRNHDTSNSSFNDSKESNEISEAECDRDNGPRGNYGEPS 1988

  Fly  1992 KRSPQPKDQRTTEEMRKLIERNETGPKQLQLQQANGA-GFTAYDTMAV 2038
            :.|.:..|....:|..||::|||..||..:...|:|: |.||||||||
Mosquito  1989 EASSKSNDAINGDETEKLLKRNEVKPKYTKQTAASGSTGLTAYDTMAV 2036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam1NP_001246162.1 IgI_1_Dscam 38..136 CDD:409547 83/97 (86%)
Ig strand A 39..42 CDD:409547 2/2 (100%)
Ig strand A' 48..52 CDD:409547 3/3 (100%)
Ig strand B 55..64 CDD:409547 5/8 (63%)
Ig strand C 70..76 CDD:409547 4/5 (80%)
Ig strand C' 78..81 CDD:409547 2/2 (100%)
Ig strand D 87..90 CDD:409547 2/2 (100%)
Ig strand E 95..100 CDD:409547 3/4 (75%)
Ig strand F 113..121 CDD:409547 6/7 (86%)
Ig strand G 124..136 CDD:409547 9/11 (82%)
IgI_2_Dscam 246..343 CDD:409545 64/96 (67%)
Ig strand A 247..250 CDD:409545 1/2 (50%)
Ig strand A' 260..264 CDD:409545 0/3 (0%)
Ig strand B 267..274 CDD:409545 1/6 (17%)
Ig strand C 282..288 CDD:409545 4/5 (80%)
Ig strand C' 294..297 CDD:409545 1/2 (50%)
Ig strand D 303..307 CDD:409545 3/3 (100%)
Ig strand E 309..315 CDD:409545 5/5 (100%)
Ig strand F 322..330 CDD:409545 7/7 (100%)
Ig strand G 333..343 CDD:409545 9/9 (100%)
IgC2_3_Dscam 346..426 CDD:409549 67/79 (85%)
Ig strand A 347..352 CDD:409549 3/4 (75%)
Ig strand A' 355..359 CDD:409549 3/3 (100%)
Ig strand B 362..372 CDD:409549 7/9 (78%)
Ig strand C 377..383 CDD:409549 5/5 (100%)
Ig strand C' 384..387 CDD:409549 2/2 (100%)
Ig strand E 392..398 CDD:409549 4/5 (80%)
Ig strand F 405..413 CDD:409549 6/7 (86%)
Ig strand G 416..426 CDD:409549 8/9 (89%)
IgI_4_Dscam 432..527 CDD:409548 81/94 (86%)
Ig strand A 432..435 CDD:409548 2/2 (100%)
Ig strand A' 441..445 CDD:409548 3/3 (100%)
Ig strand B 448..457 CDD:409548 8/8 (100%)
Ig strand C 462..468 CDD:409548 5/5 (100%)
Ig strand C' 470..473 CDD:409548 2/2 (100%)
Ig strand D 478..486 CDD:409548 7/7 (100%)
Ig strand E 490..499 CDD:409548 7/8 (88%)
Ig strand F 506..514 CDD:409548 6/7 (86%)
Ig strand G 517..527 CDD:409548 9/9 (100%)
IgI_5_Dscam 531..618 CDD:409550 79/86 (92%)
Ig strand A 531..533 CDD:409550 1/1 (100%)
Ig strand A' 538..542 CDD:409550 3/3 (100%)
Ig strand B 545..552 CDD:409550 6/6 (100%)
Ig strand C 559..565 CDD:409550 4/5 (80%)
Ig strand C' 566..568 CDD:409550 1/1 (100%)
Ig strand D 575..579 CDD:409550 3/3 (100%)
Ig strand E 582..588 CDD:409550 5/5 (100%)
Ig strand F 596..604 CDD:409550 7/7 (100%)
Ig strand G 608..618 CDD:409550 7/9 (78%)
Ig 621..718 CDD:472250 27/102 (26%)
Ig strand B 639..643 CDD:409353 0/3 (0%)
Ig strand C 653..657 CDD:409353 0/3 (0%)
Ig strand E 684..688 CDD:409353 0/3 (0%)
Ig strand F 698..703 CDD:409353 2/4 (50%)
Ig strand G 711..714 CDD:409353 0/2 (0%)
IgI_7_Dscam 721..815 CDD:409546 81/94 (86%)
Ig strand A 721..725 CDD:409546 3/3 (100%)
Ig strand A' 730..734 CDD:409546 3/3 (100%)
Ig strand B 737..746 CDD:409546 7/8 (88%)
Ig strand C 752..758 CDD:409546 5/5 (100%)
Ig strand C' 764..767 CDD:409546 2/2 (100%)
Ig strand D 775..778 CDD:409546 2/2 (100%)
Ig strand E 780..786 CDD:409546 2/5 (40%)
Ig strand F 793..801 CDD:409546 7/7 (100%)
Ig strand G 806..815 CDD:409546 6/8 (75%)
Ig 818..916 CDD:472250 87/97 (90%)
Ig strand B 836..840 CDD:409353 2/3 (67%)
Ig strand C 849..853 CDD:409353 3/3 (100%)
Ig strand E 880..884 CDD:409353 3/3 (100%)
Ig strand F 894..899 CDD:409353 4/4 (100%)
FN3 <899..1212 CDD:442628 253/315 (80%)
Ig strand G 907..910 CDD:409353 1/2 (50%)
FN3 1222..1312 CDD:238020 59/89 (66%)
Ig <1339..1406 CDD:472250 51/66 (77%)
Ig strand C 1350..1354 CDD:409358 3/3 (100%)
Ig strand E 1372..1376 CDD:409358 3/3 (100%)
Ig strand F 1386..1391 CDD:409358 3/4 (75%)
Ig strand G 1399..1402 CDD:409358 2/2 (100%)
FN3 1409..1499 CDD:238020 67/89 (75%)
FN3 1504..1584 CDD:238020 64/79 (81%)
Dscam_C 1893..2008 CDD:463546 84/115 (73%)
Dscam1XP_061517328.1 None

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