Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004916122.1 | Gene: | dscaml1 / 100491996 | XenbaseID: | XB-GENE-922538 | Length: | 2043 | Species: | Xenopus tropicalis |
Alignment Length: | 2117 | Identity: | 628/2117 - (29%) |
---|---|---|---|
Similarity: | 990/2117 - (46%) | Gaps: | 230/2117 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 FLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAED 105
Fly 106 YRQEVHAQVYACLARNQFGSIISRDVHVRAVVSQHYEEDIHKAFVIRGNSAILKCDIPSFVADFV 170
Fly 171 NVISWHSDEKENFYPGTEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGR 235
Fly 236 LVITEPVGSVSPQLSGNGNQEHITLTRVPKMG-SVTLMCPAQAYPVPFFRWYKFIEGTTRKQAVV 299
Fly 300 LNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPA 364
Fly 365 VFTCQYTGNPIKTVSWMKDGKAI---------GHSEPVLRIESVKKEDKGMYQCFVRNDQESAEA 420
Fly 421 SAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYV 485
Fly 486 TVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVT 550
Fly 551 CPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLE 615
Fly 616 VQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRIS 680
Fly 681 EKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKA 745
Fly 746 DGFPKPQVTWKKAVGD-TPGEYKDLKKSDNIRV-EEGTLHVDNIQKTNEGYYLCEAINGIGSGLS 808
Fly 809 AVIMISVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEI 873
Fly 874 LSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSW 938
Fly 939 AQPYDGNSPLDRYIIEFKRSRASW--SEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTS 1001
Fly 1002 QSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYV 1066
Fly 1067 FETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACT 1131
Fly 1132 TLTSQTIRVGWVSPPLESANGVIKTYKVVY---APSDEWYDETKRHYKKTASSDTVLHGLKKYTN 1193
Fly 1194 YTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQPNGIITQYTVY 1258
Fly 1259 SKAEG------AETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQ 1317
Fly 1318 VPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFS----ANDRMRVL-PDGSLLIK 1377
Fly 1378 SVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDTAPLHGY 1442
Fly 1443 TLHYKPEFG-EWETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKL 1506
Fly 1507 -PEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVESKKRDQIEWNQISNNVKPDNNYVVLDLEPA 1570
Fly 1571 TWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRLPAWMPEWLDLNFMVP 1635
Fly 1636 LIATVVVVAVGICVVCVALSRRRAD------------DMRGGQKDVYYDV-VYNQTMGPGATLDK 1687
Fly 1688 RRPDL----RDELGYIAPPNRKLPPVPGSNYNT-------CDRIKRGRGGLRSN------HSTWD 1735
Fly 1736 PRRNPNLYEELKAPPVPMHG--NHYGHAHGNAECHYRHPGMEDEICPYATFHLLGFREEMDPTKA 1798
Fly 1799 MNFQTFPHQNGHAGPVPGHAGTMLPPGHPGHVHSRSGSQSMPRANRYQRKN--SQGGQSSIYTPA 1861
Fly 1862 PEYDDPANCAEEDQYRRY----------------TRVNSQGGSL---------------YSGPGP 1895
Fly 1896 EYDDPAN--CAPEEDQYGSQY--------GGPYGQPYDHYGSRGSMGRRSIGSARNPGNG----- 1945
Fly 1946 ---SPEPPPPPPRNHDMSNSSFNDSKESNEISEAECDRDHGPRGNYGAVKRSPQP-----KDQRT 2002
Fly 2003 TEEMR------KLIERNETGPKQLQLQQANGAGFTAY 2033 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | 28/88 (32%) |
IG | 57..133 | CDD:214652 | 23/75 (31%) | ||
IG_like | 267..343 | CDD:214653 | 27/76 (36%) | ||
Ig | 269..340 | CDD:143165 | 25/70 (36%) | ||
IG_like | 353..425 | CDD:214653 | 20/80 (25%) | ||
IGc2 | 361..413 | CDD:197706 | 17/60 (28%) | ||
I-set | 433..527 | CDD:254352 | 38/93 (41%) | ||
IGc2 | 446..517 | CDD:197706 | 28/70 (40%) | ||
I-set | 533..618 | CDD:254352 | 32/84 (38%) | ||
IGc2 | 544..607 | CDD:197706 | 24/62 (39%) | ||
Ig | 641..714 | CDD:143165 | 25/72 (35%) | ||
IGc2 | 735..804 | CDD:197706 | 23/70 (33%) | ||
I-set | 819..914 | CDD:254352 | 32/94 (34%) | ||
Ig | 833..921 | CDD:299845 | 34/87 (39%) | ||
FN3 | 918..1011 | CDD:238020 | 35/94 (37%) | ||
FN3 | 1018..1116 | CDD:238020 | 32/97 (33%) | ||
FN3 | 1124..1217 | CDD:238020 | 34/95 (36%) | ||
FN3 | 1222..1312 | CDD:238020 | 31/95 (33%) | ||
Ig | 1339..1406 | CDD:299845 | 27/71 (38%) | ||
FN3 | 1409..1499 | CDD:238020 | 26/90 (29%) | ||
FN3 | 1504..1584 | CDD:238020 | 25/80 (31%) | ||
Dscam_C | 1890..2008 | CDD:289151 | 26/146 (18%) | ||
dscaml1 | XP_004916122.1 | Ig | 42..113 | CDD:319273 | 22/70 (31%) |
Ig | 128..217 | CDD:386229 | 33/94 (35%) | ||
I-set | 232..310 | CDD:369462 | 29/90 (32%) | ||
IG_like | 328..388 | CDD:214653 | 17/59 (29%) | ||
Ig_3 | 407..488 | CDD:372822 | 33/80 (41%) | ||
Ig | 504..574 | CDD:386229 | 28/69 (41%) | ||
Ig | 614..680 | CDD:319273 | 25/71 (35%) | ||
Ig_DSCAM | 706..784 | CDD:143211 | 24/77 (31%) | ||
Ig | 802..890 | CDD:386229 | 34/87 (39%) | ||
FN3 | 886..980 | CDD:238020 | 35/95 (37%) | ||
FN3 | 987..1084 | CDD:238020 | 32/97 (33%) | ||
FN3 | 1092..1185 | CDD:238020 | 34/95 (36%) | ||
FN3 | 1190..1281 | CDD:238020 | 31/95 (33%) | ||
IGc2 | 1305..1369 | CDD:197706 | 25/64 (39%) | ||
FN3 | 1383..1473 | CDD:238020 | 25/89 (28%) | ||
FN3 | 1487..1563 | CDD:238020 | 25/77 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 137 | 1.000 | Domainoid score | I4848 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H79549 | |
Inparanoid | 1 | 1.050 | 965 | 1.000 | Inparanoid score | I326 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9434 | |
Panther | 1 | 1.100 | - | - | O | PTHR10075 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1391 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.160 |