| Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038950842.1 | Gene: | Palld / 100360205 | RGDID: | 2322545 | Length: | 1409 | Species: | Rattus norvegicus |
| Alignment Length: | 1019 | Identity: | 195/1019 - (19%) |
|---|---|---|---|
| Similarity: | 309/1019 - (30%) | Gaps: | 416/1019 - (40%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 32 PDADQKG---PVFLKEPTNRIDFSNSTGAE-----IECKASGNPMPEIIWIRSDGTAVGDVPGLR 88
Fly 89 QISSDGKLVFPPFR------AEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVV---------- 137
Fly 138 -------SQHYEEDIHKAFVIRGNSAILKCDIPSFVADFVNV-----------ISWHSDEKE--N 182
Fly 183 FYP---------GTEYDGKYLVLPSGELHIREVGPE-------DGYKSYQCRTKHRLTGETRL-- 229
Fly 230 ---------SATKGRL-----------------------VITEPVG-----SVSPQLSGNGN--- 254
Fly 255 -QEHI------------TLTRVPKMGSV------------------------------------- 269
Fly 270 -TLMCPAQAYPVP-FFRW-----------------YKFIEGTT---------------------- 293
Fly 294 --------------RKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYL----CVVNN---------- 330
Fly 331 ---------------------------------SVGG----------ESVETVLTVTAPLSAKID 352
Fly 353 PPTQTVD---------------------------FGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS 390
Fly 391 EPVLRIE------------SVKKEDKGMYQCFVRNDQESAEASAELKLGG--------------- 428
Fly 429 ---------------------RFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKK 472
Fly 473 IANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNV-----YGLP- 531
Fly 532 YIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALP-----INRKQKVFPNGTLIIENVER 591
Fly 592 NSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAYEDLINMGDSIDLFCQIQ---KGDRPIK 653
Fly 654 VHWSFERSA--GDYGFDQVQPQMRTNRISEKTSMISIPSASPAH 695 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | 29/105 (28%) |
| IG | 57..133 | CDD:214652 | 22/86 (26%) | ||
| IG_like | 267..343 | CDD:214653 | 29/224 (13%) | ||
| Ig | 269..340 | CDD:143165 | 27/219 (12%) | ||
| IG_like | 353..425 | CDD:214653 | 22/110 (20%) | ||
| IGc2 | 361..413 | CDD:197706 | 17/63 (27%) | ||
| I-set | 433..527 | CDD:254352 | 32/93 (34%) | ||
| IGc2 | 446..517 | CDD:197706 | 26/70 (37%) | ||
| I-set | 533..618 | CDD:254352 | 20/89 (22%) | ||
| IGc2 | 544..607 | CDD:197706 | 18/67 (27%) | ||
| Ig | 641..714 | CDD:143165 | 15/60 (25%) | ||
| IGc2 | 735..804 | CDD:197706 | |||
| I-set | 819..914 | CDD:254352 | |||
| Ig | 833..921 | CDD:299845 | |||
| FN3 | 918..1011 | CDD:238020 | |||
| FN3 | 1018..1116 | CDD:238020 | |||
| FN3 | 1124..1217 | CDD:238020 | |||
| FN3 | 1222..1312 | CDD:238020 | |||
| Ig | 1339..1406 | CDD:299845 | |||
| FN3 | 1409..1499 | CDD:238020 | |||
| FN3 | 1504..1584 | CDD:238020 | |||
| Dscam_C | 1890..2008 | CDD:289151 | |||
| Palld | XP_038950842.1 | IgI_2_Titin_Z1z2-like | 278..369 | CDD:409564 | |
| Ig strand B | 296..300 | CDD:409564 | |||
| Ig strand C | 309..313 | CDD:409564 | |||
| Ig strand E | 335..339 | CDD:409564 | |||
| Ig strand F | 349..354 | CDD:409564 | |||
| Ig strand G | 362..365 | CDD:409564 | |||
| I-set | 449..546 | CDD:400151 | 28/108 (26%) | ||
| Ig strand A' | 454..458 | CDD:409353 | 1/9 (11%) | ||
| Ig strand B | 466..474 | CDD:409353 | 2/7 (29%) | ||
| Ig strand C | 479..484 | CDD:409353 | 1/4 (25%) | ||
| Ig strand C' | 487..489 | CDD:409353 | 0/1 (0%) | ||
| Ig strand D | 495..500 | CDD:409353 | 1/4 (25%) | ||
| Ig strand E | 511..516 | CDD:409353 | 0/4 (0%) | ||
| Ig strand F | 525..533 | CDD:409353 | 2/7 (29%) | ||
| Ig strand G | 536..546 | CDD:409353 | 3/12 (25%) | ||
| IgI_1_Palladin_C | 1027..1118 | CDD:409474 | 20/90 (22%) | ||
| Ig strand B | 1044..1048 | CDD:409474 | 1/3 (33%) | ||
| Ig strand C | 1057..1061 | CDD:409474 | 0/3 (0%) | ||
| Ig strand E | 1084..1088 | CDD:409474 | 0/3 (0%) | ||
| Ig strand F | 1098..1103 | CDD:409474 | 1/4 (25%) | ||
| Ig strand G | 1111..1114 | CDD:409474 | 0/2 (0%) | ||
| Ig | 1161..1251 | CDD:416386 | 32/93 (34%) | ||
| Ig strand A | 1161..1164 | CDD:409353 | 1/2 (50%) | ||
| Ig strand A' | 1167..1172 | CDD:409353 | 0/4 (0%) | ||
| Ig strand B | 1177..1184 | CDD:409353 | 1/6 (17%) | ||
| Ig strand C | 1191..1197 | CDD:409353 | 2/5 (40%) | ||
| Ig strand C' | 1198..1201 | CDD:409353 | 2/2 (100%) | ||
| Ig strand D | 1207..1213 | CDD:409353 | 1/7 (14%) | ||
| Ig strand E | 1216..1226 | CDD:409353 | 4/9 (44%) | ||
| Ig strand F | 1230..1238 | CDD:409353 | 5/7 (71%) | ||
| Ig strand G | 1240..1251 | CDD:409353 | 2/10 (20%) | ||
| IgI_Myotilin_C | 1260..1351 | CDD:409473 | 21/115 (18%) | ||
| Ig strand B | 1277..1281 | CDD:409473 | 0/3 (0%) | ||
| Ig strand C | 1290..1294 | CDD:409473 | 1/3 (33%) | ||
| Ig strand E | 1317..1321 | CDD:409473 | 1/3 (33%) | ||
| Ig strand F | 1331..1336 | CDD:409473 | 2/4 (50%) | ||
| Ig strand G | 1344..1347 | CDD:409473 | 0/2 (0%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.000 | |||||