Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012811963.1 | Gene: | ncam2 / 100151722 | XenbaseID: | XB-GENE-1217730 | Length: | 865 | Species: | Xenopus tropicalis |
Alignment Length: | 704 | Identity: | 172/704 - (24%) |
---|---|---|---|
Similarity: | 302/704 - (42%) | Gaps: | 111/704 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 447 GPSVFLKCVAGGNPTPEISW-ELDGKKIANNDRYQVGQYVTVNGD-VVSYLNITSVHANDGGLYK 509
Fly 510 CIAKSKVGVAEHSA-------KLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVW--ER 565
Fly 566 DNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEG-YSARGSLE-----VQVMVLPQI 624
Fly 625 VPFAYEDLINMG----DSIDLFCQIQKGDRP-IKVHWSFERSAGDYGFDQVQPQMRTNRISEKTS 684
Fly 685 MISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFP 749
Fly 750 KPQVTWKKAVGDTPGE-YKDLKKSDNIRVE------EGTLHVDNIQKTNEGYYLCEAINGIGSGL 807
Fly 808 SAVIMISVQAPPEFTEKLRNQT---ARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKN-DNRYT 868
Fly 869 IREEILSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRS 933
Fly 934 VQLSWAQP-YDGNSPLDRYIIEFKR-SRASWSEIDRVIVPGHTTEAQV--QKLSPATTYNIRIVA 994
Fly 995 ENAIGTSQSSEA---VTIITAEEAP---SGKP---QNIKVEPVNQTTMRVTWKPPPRTEWNGEIL 1050
Fly 1051 GYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIG 1104 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | 25/88 (28%) | ||
IGc2 | 446..517 | CDD:197706 | 21/71 (30%) | ||
I-set | 533..618 | CDD:254352 | 22/92 (24%) | ||
IGc2 | 544..607 | CDD:197706 | 17/64 (27%) | ||
Ig | 641..714 | CDD:143165 | 16/73 (22%) | ||
IGc2 | 735..804 | CDD:197706 | 21/75 (28%) | ||
I-set | 819..914 | CDD:254352 | 24/98 (24%) | ||
Ig | 833..921 | CDD:299845 | 21/88 (24%) | ||
FN3 | 918..1011 | CDD:238020 | 26/99 (26%) | ||
FN3 | 1018..1116 | CDD:238020 | 19/90 (21%) | ||
FN3 | 1124..1217 | CDD:238020 | |||
FN3 | 1222..1312 | CDD:238020 | |||
Ig | 1339..1406 | CDD:299845 | |||
FN3 | 1409..1499 | CDD:238020 | |||
FN3 | 1504..1584 | CDD:238020 | |||
Dscam_C | 1890..2008 | CDD:289151 | |||
ncam2 | XP_012811963.1 | Ig | 50..141 | CDD:386229 | 23/83 (28%) |
IG_like | 150..234 | CDD:214653 | 23/94 (24%) | ||
Ig | 237..330 | CDD:386229 | 23/104 (22%) | ||
Ig | 329..426 | CDD:386229 | 27/101 (27%) | ||
IG_like | 442..520 | CDD:214653 | 19/82 (23%) | ||
FN3 | 525..617 | CDD:238020 | 25/96 (26%) | ||
fn3 | 623..706 | CDD:365830 | 20/97 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |