Sequence 1: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106976.1 | Gene: | il6st / 100006778 | ZFINID: | ZDB-GENE-080104-6 | Length: | 866 | Species: | Danio rerio |
Alignment Length: | 972 | Identity: | 190/972 - (19%) |
---|---|---|---|
Similarity: | 321/972 - (33%) | Gaps: | 303/972 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 724 WILEPTDKAFAQGS----------DAKVE------------CKADG---FPKPQVTWKKAVGDTP 763
Fly 764 GEYKDLKKSDNIRVEEGTLHVD-NIQKTNEGYYL-CEA----INGIGSGLSAVIMISVQAPPEFT 822
Fly 823 EKLRNQTARRGEPAVLQCEAKGEK-----PIGILWNMNNMRLDPKNDNRYTIREEI--------- 873
Fly 874 -----------LST-----------GVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQE 916
Fly 917 VPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSR---ASWSEIDRVIVPGHTTEAQ 978
Fly 979 VQKLSPATTY--NIRIVAENAIGTSQSSEAVTIITAEEAPSGKP--------QNIKVEPVNQT-T 1032
Fly 1033 MRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLEL---QNLRVYTQYS 1094
Fly 1095 VVIQAFNKIGAGPLSEEEKQFTAEGTPSQ----PPSDTACTTLTSQ-------TIRVGWVSPPLE 1148
Fly 1149 SANGV-IKTYKVVYAPSDEWYDE--TKRHYKKTAS--SDTVLHG-LKKYTNYTMQVLATTAGGDG 1207
Fly 1208 VRSVPI---------HCQ-----TEP-----DVPE-APTDVKALVMGNAAILVSWR--PPAQPNG 1250
Fly 1251 IITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIG------------- 1302
Fly 1303 --EGQQSKSIVAM--------------------------------PSDQVPAKIASFDDTFTATF 1333
Fly 1334 KEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKD 1398
Fly 1399 SITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVSVDSQ 1463
Fly 1464 KH--NIEGLLCGSRYQVYATG------------FNNIGAGEASDILNTRTKGQKPKLPEKPR 1511 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 | |||
I-set | 533..618 | CDD:254352 | |||
IGc2 | 544..607 | CDD:197706 | |||
Ig | 641..714 | CDD:143165 | |||
IGc2 | 735..804 | CDD:197706 | 21/99 (21%) | ||
I-set | 819..914 | CDD:254352 | 23/130 (18%) | ||
Ig | 833..921 | CDD:299845 | 23/123 (19%) | ||
FN3 | 918..1011 | CDD:238020 | 22/97 (23%) | ||
FN3 | 1018..1116 | CDD:238020 | 21/109 (19%) | ||
FN3 | 1124..1217 | CDD:238020 | 23/119 (19%) | ||
FN3 | 1222..1312 | CDD:238020 | 24/107 (22%) | ||
Ig | 1339..1406 | CDD:299845 | 13/66 (20%) | ||
FN3 | 1409..1499 | CDD:238020 | 21/103 (20%) | ||
FN3 | 1504..1584 | CDD:238020 | 3/8 (38%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
il6st | NP_001106976.1 | FN3 | 127..219 | CDD:304408 | 22/109 (20%) |
FN3 | 230..327 | CDD:238020 | 22/100 (22%) | ||
FN3 | 543..624 | CDD:214495 | 22/83 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |