DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12164 and Sbsn

DIOPT Version :9

Sequence 1:NP_001286157.1 Gene:CG12164 / 35651 FlyBaseID:FBgn0033158 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_757342.2 Gene:Sbsn / 282619 MGIID:2446326 Length:682 Species:Mus musculus


Alignment Length:30 Identity:10/30 - (33%)
Similarity:15/30 - (50%) Gaps:7/30 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLSASCALIISL-------AYAHPPEGV 28
            |:.|.:||.|::.|       |:..|.|.|
Mouse     3 LVSLLSSCCLLVLLGTLPARAAHEDPVEKV 32

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12164NP_001286157.1 DUF4816 28..70 CDD:292704 1/1 (100%)
DUF4816 184..225 CDD:292704
DUF4816 234..273 CDD:292704
DUF4816 282..322 CDD:292704
SbsnNP_757342.2 Borrelia_P83 <462..>600 CDD:114011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2087
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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