DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and GIS1

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_010381.1 Gene:GIS1 / 851670 SGDID:S000002503 Length:894 Species:Saccharomyces cerevisiae


Alignment Length:561 Identity:110/561 - (19%)
Similarity:187/561 - (33%) Gaps:169/561 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   820 GSPSKKRTRKRFNSSGVDMELGHDDDDEEE-----DSDEDSMGEDTVSKDLLNSTQTPPCSPIKS 879
            |..:||..||    ||....|.:|.::.|:     |:|.|...:.....:|||.:.    ..:::
Yeast   323 GCGNKKEERK----SGPFSNLSYDSNESEQRGSITDNDNDLFQKVRSFDELLNHSS----QELQN 379

  Fly   880 LNNSSSPVGINRRTAILLTRKAQAALKRPSEPLTTPVKEEQHNSQSSNTQSTSGS-------SSS 937
            |.::.:|:..|    |.:.|...::|:.     |||....|..:.:..|.|...|       ..|
Yeast   380 LEDNKNPLFSN----INMNRPQSSSLRS-----TTPNGVNQFLNMNQTTISRISSPLLSRMMDLS 435

  Fly   938 VTTAATAASSGAGTLNHVLS------SAPPTASSF---ALTQNNSSGGGALASGTG----IGGSS 989
            .....|....|:.....||:      :.|..:|:|   :||..||......|:.|.    ..||.
Yeast   436 NIVEPTLDDPGSKFKRKVLTPQLPQMNIPSNSSNFGTPSLTNTNSLLSNITATSTNPSTTTNGSQ 500

  Fly   990 SAGTAAAASL-TSTALAMNSKLSANLPVKSPKRPGRYRRVPEVRHSSSMSPKKSPNPAVTVSQAL 1053
            :.....|..: ||.|.::|:.:|:.                    ::|.:...|.|...||..::
Yeast   501 NHNNVNANGINTSAAASINNNISST--------------------NNSANNSSSNNNVSTVPSSM 545

  Fly  1054 PMPETLPFERIPDSFRVYRANNQRDV-SDSDD----------APSQSSSPCSSCSDFSMSGSCSD 1107
            ....||              |....: .|:||          |.|.::||..:....|       
Yeast   546 MHSSTL--------------NGTSGLGGDNDDNMLALSLATLANSATASPRLTLPPLS------- 589

  Fly  1108 FDSDEASEGDADGDPDRDGGRSRSEERDSTSQEGTTDAMDMQHASLNNVQGNNGNMAISSSSGGS 1172
                         .|....|                      |.|.      ||||..::|..||
Yeast   590 -------------SPMNPNG----------------------HTSY------NGNMMNNNSGNGS 613

  Fly  1173 GGSSSEDDEL---EERPLSARQNKPMKVGTRGTPTPTTMARAVALSAGRGRGKRRSNLSESTSST 1234
            .||:|..:.:   .....||..|..:.     :|.||.....::|.....:....|.|:..:.||
Yeast   614 NGSNSYSNGVTTAAATTTSAPHNLSIV-----SPNPTYSPNPLSLYLTNSKNPLNSGLAPLSPST 673

  Fly  1235 ATPPPLRRAGKLR---SATPNASPLVNNIKARRNTTAAGSAPLTNNNRSKHSEDSASSERHNN-H 1295
            :..|.|:|...:.   |...:.||:.:.:...|:.....:..:.::..:.:|..:...:..|| :
Yeast   674 SNIPFLKRNNVVTLNISREASKSPISSFVNDYRSPLGVSNPLMYSSTINDYSNGTGIRQNSNNIN 738

  Fly  1296 SHGQKPALEPLQLVWAKCRGYPWYPALILDPKTPKGFVYNG 1336
            .....|:..||.                   |.||  :.||
Yeast   739 PLDAGPSFSPLH-------------------KKPK--ILNG 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484
PHD_BRPF 283..336 CDD:277047
ePHD_BRPF 340..456 CDD:277140
Bromo_brd1_like 615..712 CDD:99944
BR140_related 1303..1414 CDD:99900 7/34 (21%)
GIS1NP_010381.1 JmjN 11..52 CDD:128818
JmjC 191..307 CDD:202224
zf-C2H2_4 828..851 CDD:290605
C2H2 Zn finger 830..851 CDD:275368
zf-H2C2_2 842..868 CDD:290200
C2H2 Zn finger 859..876 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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