DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and AT1G77800

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001321109.1 Gene:AT1G77800 / 844117 AraportID:AT1G77800 Length:1425 Species:Arabidopsis thaliana


Alignment Length:640 Identity:147/640 - (22%)
Similarity:212/640 - (33%) Gaps:233/640 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 HH--STPRPHKDHPTPGGGGAEARNGCSSASAGGGSASGVSARQYA----------NPESLVSYN 125
            ||  |:..|..||      |.::    :|:|:|....:..|.|..:          ||..|..:|
plant   725 HHGKSSVIPSDDH------GEQS----NSSSSGVMMENAFSLRPNSSQNRGNLNCPNPIILDLFN 779

  Fly   126 EEEATVTFN----LDGKSVRLGIDDALPLVEDEEFAALVARGCILNADAPPLEENAPWAR----- 181
             :||...||    :..:...||.:..|....|.:.|.:..     |.|..  ||.....:     
plant   780 -QEAYPGFNPHRYIHKELSELGKEQTLKSSTDSDVARMTT-----NFDGS--EEGNKHLQGAETF 836

  Fly   182 VQVPVARVAEIPDYRVSDAPPRPLAYYRF----IEKSLEELDGEVEYDV--------DEEDS-AW 233
            :|:..||...|.|....|.....|.||:.    ...|.::|...:.|:|        ||:.. .|
plant   837 LQLSKARKLGILDLSPEDELEGELLYYQLQLLGTAVSRKQLSDNLVYEVAKKLPLEIDEQHGRRW 901

  Fly   234 --------------------LEHMNEERQRL-----GLNAVGIDTMELLMDRLE----------- 262
                                .|..|::.|.:     ...|.......|..|..|           
plant   902 DDVLVNKYFHDVREARKQGRKEQRNKQAQAVLAAATAAAATSSRNTSLRKDMSEEPAQQEMSTSR 966

  Fly   263 -------------KESHFQAAANGTPTGVE---------VDDDAVCCICLDGECQNTNVILFCDM 305
                         |||..:.|.:|.|:...         |::...|.||...| ...|:|:.|..
plant   967 RKVVGSSHLVPQTKESLLKMAVSGPPSEKRSDHHTPDFLVENPRTCDICRRSE-TIWNLIVVCSS 1030

  Fly   306 CNLAVHQDCYGVPYIPEGQWLCRRCLQSPSKP-----------VNCVLCPNAGGAFKQTDHGQWA 359
            |.:|||.|||.......|.|.|..|.:|.|:|           ..|.||....|||::|.:|||.
plant  1031 CKVAVHIDCYKCAKESTGPWYCELCAESSSEPSFNFGEKPNSSTECTLCGGTTGAFRKTTNGQWV 1095

  Fly   360 HVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGLGACIQCHRNSCYAAFHVTCA 424
            |..||.|..|..|.... :.|:..:|::  |:....|.|| ::..|||.:|...:|...||.:||
plant  1096 HAFCAEWSLESTFRRGQ-INPVQGMESL--AKKTDNCCVC-QRIYGACTKCSYGNCQTTFHPSCA 1156

  Fly   425 QQAGLYMTMDTVKDGHNDSSMHVQKFAYCHAHTPADAKLKMNVPDFEDTRHKMKEARKALAKKRS 489
            :.||.:||         ....|..| |||.                   :|.|::..||.::|  
plant  1157 RSAGFHMT---------GGGKHPHK-AYCE-------------------KHSMEQKAKAESQK-- 1190

  Fly   490 TAPVVLIPTIPPDRVQEIATMVTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQ 554
                                                                        ||   
plant  1191 ------------------------------------------------------------HG--- 1192

  Fly   555 RNGIEGSPDTGELYRQLKYWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVV 609
                      .|..:.||::   |.:|||.|||||.:.||||||......|.|::
plant  1193 ----------AEELKSLKHY---RVELERLRLLCERIVKREKLKRELAISSHEIL 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 112/489 (23%)
Bromo_brd1_like 615..712 CDD:99944
MSCRAMM_ClfA <1080..1163 CDD:468110
PWWP_BRPF 1303..1414 CDD:438964
AT1G77800NP_001321109.1 PHD_SF 285..325 CDD:473978
PHD_SF 338..455 CDD:473978
PHD_2 1022..1055 CDD:463990 13/32 (41%)
ePHD 1076..1178 CDD:277046 40/134 (30%)
Blue background indicates that the domain is not in the aligned region.

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