DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and AT1G20670

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_173490.1 Gene:AT1G20670 / 838655 AraportID:AT1G20670 Length:652 Species:Arabidopsis thaliana


Alignment Length:570 Identity:143/570 - (25%)
Similarity:214/570 - (37%) Gaps:156/570 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   603 RISEEVVMLQLNPLEAA----------LNKLLDALEARDSMQIFREPVDTSEVPDYTDIVKQPMD 657
            :.|:...:||.:|:|:.          |..:||.|:.:|:..::.:|||..|:|||.:|:|.|||
plant   153 KASKATDILQGSPVESGPTTPLPDKKLLLFILDRLQKKDTYGVYSDPVDPEELPDYFEIIKNPMD 217

  Fly   658 LGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGIRMRDQAAPLFVQVR------ 716
            ..|:|.||....|::|||.|.|..|:..|.:.||:.|||:||....:::.|...|..:|      
plant   218 FSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSADTVYYRQARAIQELAKKDFENLRQDSDDE 282

  Fly   717 -----KELQRDGLLARSQRYHVDHVE-AEVEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTY 775
                 ::.|:...:||..|....|.| :.:::        .||| |....||..|.|..... .|
plant   283 EPQSQQQQQQQPKVARRGRPPKKHPEPSSIDR--------TASE-ISADALIPGDSSNKFSG-AY 337

  Fly   776 RTKKIKQIRLEISRMRKSLQKARFAARHSS----HANQSQS----DDEDTLGGSPSK---KRTRK 829
                         .:||:....:|....||    |.:::||    |.|.....|..|   |...|
plant   338 -------------NLRKAPPSYKFRQAESSVRINHNSETQSGWSVDWESEFPSSVVKAVNKYGMK 389

  Fly   830 RFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSS---PVGINR 891
            .||.           ||...|:          ...|..|||.|  |.:.:|.:...   |||:|.
plant   390 HFNV-----------DDNRRDT----------YNHLSTSTQEP--SVLTTLEDELKQLIPVGLNM 431

  Fly   892 R--TAILLTRKA----QAALKRPSEPLTT----------------PVKEEQHNSQSSNTQSTSGS 934
            .  .|..|.|.|    ..|.|..|..:.|                |...|:.:||..|...:||.
plant   432 EYGYAKSLARYAANLGPVAWKIASRRIETVLPSGIKFGQGWVGENPAGPEEDDSQKQNILMSSGK 496

  Fly   935 SSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSSSAGTAAAASL 999
            .......|:...|     |.:||   ||||               .|...||...::..|...:.
plant   497 QKCSNDLASDDHS-----NRILS---PTAS---------------VSSAFIGNRHASSQAIEETT 538

  Fly  1000 TSTALAMNSKL--------SANLPVKSPKRPGRYRRVPEVRHSSS----MSPKKSP---NPAVTV 1049
            ...|..:|.::        .|.|.:|:....|..|   ...|:::    ::.::.|   |.|..|
plant   539 PPPARVLNPEIDHPSSSSHQAGLLIKTESSNGLIR---GFNHNANQMLGIARQQQPNVSNEATPV 600

  Fly  1050 SQ----ALPMPETLPFERIPDSFRVYRANNQRDVSDSDDAPSQSSSPCSS 1095
            ||    ..|.|:. .|.|.|...      |.|.||.:....:|.:...||
plant   601 SQQQGSLFPYPKQ-EFHRFPPDL------NARLVSPNSPGSNQQTGSSSS 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 6/31 (19%)
Bromo_brd1_like 615..712 CDD:99944 39/106 (37%)
MSCRAMM_ClfA <1080..1163 CDD:468110 4/16 (25%)
PWWP_BRPF 1303..1414 CDD:438964
AT1G20670NP_173490.1 Bromodomain 176..272 CDD:99922 37/95 (39%)
Blue background indicates that the domain is not in the aligned region.

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