DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and SDG14

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_191733.3 Gene:SDG14 / 825347 AraportID:AT3G61740 Length:1018 Species:Arabidopsis thaliana


Alignment Length:506 Identity:122/506 - (24%)
Similarity:197/506 - (38%) Gaps:135/506 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 CCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPE-GQWLCRRCLQSPSKPVNCVLCPNAGGA 349
            |.:|...|....|.::.|:.|.:||||:||||....: ..|:||.| ::|....:|.|||..|||
plant   549 CAVCRWVEDWEENKMIICNRCQVAVHQECYGVSKSQDLTSWVCRAC-ETPDIERDCCLCPVKGGA 612

  Fly   350 FKQTD-HGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGLGACIQCHRN 413
            .|.:| .|.|.||.||.:.|||.|.|...:||...:..||...:...|.:||:.. |:|:.|.: 
plant   613 LKPSDVEGLWVHVTCAWFRPEVGFLNHENMEPAVGLFKIPANSFLKVCTICKQTH-GSCVHCCK- 675

  Fly   414 SCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCH------------AHTPAD------ 460
             |...||..||.:||..|.:..::   .:.....:|..||.            .|||:.      
plant   676 -CATHFHAMCASRAGYNMELHCLE---KNGVQRTRKSVYCSFHRKPDPDSVVVVHTPSGVFGSRN 736

  Fly   461 --------AK-------LKMNVPDFEDTRHKMKEAR--------KALAKKRSTAPV---VLIPTI 499
                    ||       .||.:|.|: |:.:.:::|        :.....||...:   .:...:
plant   737 LLQNQYGRAKGSRLVLTKKMKLPGFQ-TQTQAEQSRVFDSLSAARCRIYSRSNTKIDLEAISHRL 800

  Fly   500 PPDRVQEIATMVTMQRKK---------------------EFLDRIIAYWTLKRH----YRNGVPL 539
            .......::.:..:...|                     |:|.:|:....|..|    :.:....
plant   801 KGPSHHSLSAIENLNSFKASFSFRAPFMSVFCFLGATFSEYLRKILISIYLVTHQEADFTSFRER 865

  Fly   540 LRRLQSQGNNHGVIQRNGIEG-------SPDTGEL---YRQLKYWQCLRQDLERARLLCELVRKR 594
            |:.||...|......::||.|       |...||:   ||.:|..:.: .||..|..       |
plant   866 LKHLQRTENFRVCFGKSGIHGWGLFARKSIQEGEMIIEYRGVKVRRSV-ADLREANY-------R 922

  Fly   595 EKLKVAFV-RISEEVVMLQLNPLEAALNKLLDALEARDSMQIFREPVDTSEVPD-YTDIVKQPMD 657
            .:.|..:: :||||:|                 ::|.||..|.| .::.|.:|: |..||.  |.
plant   923 SQGKDCYLFKISEEIV-----------------IDATDSGNIAR-LINHSCMPNCYARIVS--MG 967

  Fly   658 LG----------TMRAKLKECQYNSLEQLEADFDLMI------QNCLAYNN 692
            .|          |..|..:|..|:.|.:::...::.:      .||..:.|
plant   968 DGEDNRIVLIAKTNVAAGEELTYDYLFEVDESEEIKVPCLCKAPNCRKFMN 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 102/420 (24%)
Bromo_brd1_like 615..712 CDD:99944 20/95 (21%)
MSCRAMM_ClfA <1080..1163 CDD:468110
PWWP_BRPF 1303..1414 CDD:438964
SDG14NP_191733.3 PWWP_AtATX3-like 188..292 CDD:438971
PHD_TCF19_like 365..415 CDD:276992
COG5141 <518..>765 CDD:227470 70/223 (31%)
ePHD_ATX3_4_5_like 603..714 CDD:277133 41/116 (35%)
SET_SETD1-like 862..1014 CDD:380916 41/179 (23%)
Blue background indicates that the domain is not in the aligned region.

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