DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and Jade2

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001344517.1 Gene:Jade2 / 76901 MGIID:1924151 Length:901 Species:Mus musculus


Alignment Length:1133 Identity:284/1133 - (25%)
Similarity:408/1133 - (36%) Gaps:344/1133 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQPLTP----------VLTPSRKKARSR----SGGHHS--TPRPHKDHPTP------GGGG---- 90
            |:|..|          :..|:...||||    ||||..  .|..|...|.|      ||.|    
Mouse     4 PRPPAPAPGAPGFGSILPAPAPAAARSRGQRPSGGHRGARAPGEHTSPPGPPVPSSLGGLGLAEQ 68

  Fly    91 -----AEARNGCSSASAGG----GSASGVSARQYAN-PESLVS----YNEEEATVTFNLDGKSVR 141
                 .|.|...|.:|...    |..:..||.:.:. |.|..|    .||::.:..|..| ....
Mouse    69 STKQMEEKRRKYSISSDNSDTTDGHVTSTSASRCSKLPSSTKSGWPRQNEKKPSEVFRTD-LITA 132

  Fly   142 LGIDDALPLVEDEEFAALVARGCILNADAPPLEENAPWAR-----VQVPVARVAEIPDYRVSDAP 201
            :.|.|:..|..|:.:         :.||        ||.:     ||||....| ||:..|...|
Mouse   133 MKIPDSYQLSPDDYY---------ILAD--------PWRQEWEKGVQVPAGAEA-IPEPVVRLLP 179

  Fly   202 P-----------RPLAYYRFIEKSLEELDGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTME 255
            |           .|    ...|.:..:..|...||:||.|:.|||.:|.|.:.:....:...|:|
Mouse   180 PLKGPPTQMSPDSP----TLGEGAHPDWPGGSRYDLDEIDAYWLELLNSELKEMEKPELDELTLE 240

  Fly   256 LLMDRLEKESH---FQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGV 317
            .:::.||...|   .||.......|:|.|:|.||.:|...|.::.|.::|||.||:.|||.|||:
Mouse   241 RVLEELETLCHQNMAQAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGI 305

  Fly   318 PYIPEGQWLCRRCLQSPSKPVNCVLCPNAGGAFKQTDHG-QWAHVVCALWIPEVRFANTVFLEPI 381
            ..:|.|.||||.|......  .|:|||..|||.|.|..| :|.||.||||||||.......:|||
Mouse   306 LKVPTGSWLCRTCALGVQP--KCLLCPKRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPI 368

  Fly   382 DSIETIPPARWRLTCYVCKEKGLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMH 446
            ..|..||.:||.|:|.:||| ..|.||||...||..|||||||...||  .|.|:. ..||   .
Mouse   369 TKISHIPASRWALSCSLCKE-CTGTCIQCSMPSCITAFHVTCAFDRGL--EMRTIL-ADND---E 426

  Fly   447 VQKFAYCHAHTPADAKLKMNVPDFEDTRHKMKEARKALAKKRSTAPVV--LIPTIPPDRVQEIAT 509
            |:..:.|..|:....:.:......|.:: .:::..|...:|:....:.  ....:.|..|.|   
Mouse   427 VKFKSLCQEHSDGGPRSEPTSEPVEPSQ-AVEDLEKVTLRKQRLQQLEENFYELVEPAEVAE--- 487

  Fly   510 MVTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGE-------- 566
              .:...:..:|.|..||.|||......|||                    :|.|.|        
Mouse   488 --RLDLAEALVDFIYQYWKLKRRANANQPLL--------------------TPKTDEVDNLAQQE 530

  Fly   567 ---LYRQLKYWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALE 628
               |||:||.:..|||||||.|.||.:|.:||:.|....::.|::..||:..:|..|.:......
Mouse   531 QDVLYRRLKLFTHLRQDLERVRNLCYMVTRRERTKHTICKLQEQIFHLQMKLIEQDLCREPSGRR 595

  Fly   629 AR----DSMQIFRE-PVDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCL 688
            ::    ||.:..|| |..:|  |:             .:.|:|....:.|.||.......|    
Mouse   596 SKGKKNDSKRKGREGPKGSS--PE-------------KKEKVKAGPESVLGQLGLSTSFPI---- 641

  Fly   689 AYNNKDTVFYRAGIRMRDQAAPLFVQVRKELQRDGLLARSQRYHVDHVEAEVEQELRLLLAAPAS 753
                 |..|:.:.:...       ||:..|.......:.:..:..|.....:.:||         
Mouse   642 -----DGTFFNSWLAQS-------VQITAEDMAMSEWSLNSGHREDPAPGLLSEEL--------- 685

  Fly   754 EGIVQKLLILADKSQVL---KNPTYRTKKIKQIRLEISRMRKSLQKARFAARHSSHANQSQSDDE 815
                     |.|:..:|   ::|:.|..         ...||:..:.|..|:..          .
Mouse   686 ---------LQDEETLLSFMRDPSLRPG---------DPARKARGRTRLPAKKK----------P 722

  Fly   816 DTLGGSPSKKRTRKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSL 880
            ..|...||.:.|               .|...::...:|..|           ||.||.      
Mouse   723 SPLQDGPSARTT---------------PDKQPKKAWAQDGKG-----------TQGPPM------ 755

  Fly   881 NNSSSPVGINRRTAILLTRKAQAALKRPSEPLTTPVKEEQHNSQSSNTQSTSGSSSSVTTAATAA 945
              ...|    |||:..|          ||.|                                  
Mouse   756 --RKPP----RRTSSHL----------PSSP---------------------------------- 770

  Fly   946 SSGAGTLNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSSSAGTAAAASLTSTALAMNSKL 1010
            ::|...:...|.|.||.||..                                |..|| .|.|.|
Mouse   771 AAGDCPVPATLESPPPLASEI--------------------------------LDKTA-PMASDL 802

  Fly  1011 SANL--PVKSPKRPGRYRRVPEVRHSSSMSPKKSPNPAVTVSQALP-----MPE-TLPFERIPDS 1067
            :..:  |..|||..||.|...|::.|     :|||.........||     .|: :|.|:...|.
Mouse   803 NVQVPGPTVSPKPLGRLRPPREMKVS-----RKSPGARSDAGTGLPSAVAERPKVSLHFDTEADG 862

  Fly  1068 FRVYRANNQRDVSDS----DDAPSQSSS 1091
            :     .:..::|||    :|:..|.:|
Mouse   863 Y-----FSDEEMSDSEVEAEDSGVQRAS 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484 22/82 (27%)
PHD_BRPF 283..336 CDD:277047 24/52 (46%)
ePHD_BRPF 340..456 CDD:277140 56/116 (48%)
Bromo_brd1_like 615..712 CDD:99944 17/101 (17%)
BR140_related 1303..1414 CDD:99900
Jade2NP_001344517.1 EPL1 209..>578 CDD:331339 140/403 (35%)
ePHD_JADE2 326..436 CDD:277175 56/116 (48%)
Atrophin-1 <676..852 CDD:331285 58/332 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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