DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and KDM4D

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_060509.2 Gene:KDM4D / 55693 HGNCID:25498 Length:523 Species:Homo sapiens


Alignment Length:138 Identity:37/138 - (26%)
Similarity:50/138 - (36%) Gaps:35/138 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1185 RPLSARQNKPMKVGTRGTPTPTTMARAVALSAG-RGRGKRRSNLSESTSSTATPPPLRRAGKLRS 1248
            :|.:|..:...|..:..:.||...|:.:..|.| ||||:              ||...||.:|..
Human   417 QPRAAAVHSSKKPSSTPSSTPGPSAQIIHPSNGRRGRGR--------------PPQKLRAQELTL 467

  Fly  1249 ATPNASPLVNNIKARRNTTAAGSAPLTNNNRSKHSEDSASSERHNNHSHG-QKPALEPLQLVWAK 1312
            .||...||:    |....||:|..|      ....||.|..::....|.| |.|         .|
Human   468 QTPAKRPLL----AGTTCTASGPEP------EPLPEDGALMDKPVPLSPGLQHP---------VK 513

  Fly  1313 CRGYPWYP 1320
            ..|..|.|
Human   514 ASGCSWAP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484
PHD_BRPF 283..336 CDD:277047
ePHD_BRPF 340..456 CDD:277140
Bromo_brd1_like 615..712 CDD:99944
BR140_related 1303..1414 CDD:99900 4/18 (22%)
KDM4DNP_060509.2 JmjN 19..53 CDD:280526
JmjC 179..295 CDD:202224
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..523 37/138 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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