DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and kdm4b

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_989064.2 Gene:kdm4b / 394661 XenbaseID:XB-GENE-1012886 Length:1025 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484
PHD_BRPF 283..336 CDD:277047
ePHD_BRPF 340..456 CDD:277140
Bromo_brd1_like 615..712 CDD:99944
BR140_related 1303..1414 CDD:99900
kdm4bNP_989064.2 JmjN 14..55 CDD:128818
JmjC 175..291 CDD:396791
PHD_JMJD2B 624..719 CDD:277051
ePHD_JMJD2B 728..837 CDD:277184
Tudor_JMJD2B_rpt1 850..903 CDD:410535
Tudor_JMJD2B_rpt2 907..962 CDD:410538
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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