DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and CG15439

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_608836.1 Gene:CG15439 / 33651 FlyBaseID:FBgn0031606 Length:1008 Species:Drosophila melanogaster


Alignment Length:1246 Identity:262/1246 - (21%)
Similarity:407/1246 - (32%) Gaps:408/1246 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 DGEVEYDVDEEDSAWLEHMNEERQRL----------GLNAVGIDTMELLMDRLEKESHFQAAANG 273
            |.|.:.|.:.|||..     :.||.|          |:|  |:|             |..|::..
  Fly    57 DSESDSDAESEDSTL-----QLRQLLAETEPSPLENGIN--GVD-------------HCAASSPA 101

  Fly   274 TP----TGVEVDD---DAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGV-------------- 317
            .|    ..:::..   ..:||:||.....:.|.|:.||.|.::||:.||||              
  Fly   102 APVVPRAPLQLSSAPAKRMCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCS 166

  Fly   318 --PYIPEGQWLCRRCLQSPSKPVNCVLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEP 380
              |      |.|..|....|:| :|.||||.||.:|:||.|:|.|::|||::|.|.|.....|..
  Fly   167 TEP------WFCEACRAGVSEP-DCELCPNKGGIYKETDVGKWVHLICALYVPGVAFGEVEQLSS 224

  Fly   381 IDSIETIPPARW-RLTCYVCKEKGL----GACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGH 440
            :...| :..::| ...|.:| |..|    |.||.|....|...|||||||.||..:      :.|
  Fly   225 VTLFE-MQYSKWGAKVCSLC-ENALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLI------EAH 281

  Fly   441 NDSSMHVQKFAYCHAHTPADAKLKMNVPDFEDTR-HKMKEAR--KALAKKRSTAPVVLIPTIPPD 502
            ::.......:|:|..|:..: .:|....::...| :.|:.||  :|||.:..|      |...|:
  Fly   282 HEDDAADPFYAHCKVHSEKE-MIKKRRRNYHTLRLNMMQRAREKEALAAEHET------PAPHPN 339

  Fly   503 RVQEIATMVTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGEL 567
            ..|     ..:|||                       |.::|.:...|                 
  Fly   340 PAQ-----ARIQRK-----------------------LLKIQHKYTRH----------------- 359

  Fly   568 YRQLK--YW---QCLRQDLERARLLC-ELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDA 626
             ::||  .|   |.:.:.|..:...| .|:.|.|.:.|....:.:.         ||.:|.|   
  Fly   360 -KELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQR---------EAHINAL--- 411

  Fly   627 LEARDSMQIFREPVDTSEVPDYTDIVKQ----PMDLGTMRAKLKECQYNSLEQLEADFDLMIQNC 687
                                  |||.|:    |                                
  Fly   412 ----------------------TDIRKKWHIAP-------------------------------- 422

  Fly   688 LAYNNKDTVFYRAGI-RMRDQAAPLFVQVRKEL-QRDGLLARSQRYHVDHVEAEVEQELRLLLAA 750
             |::.:.|.:|...| ||.|     |.|.::|| ..:.:|::.|    |.:.|:.:..|.     
  Fly   423 -AFSVEFTAYYMDRIVRMDD-----FRQQQRELISHNAILSKDQ----DVLRAQYDTALE----- 472

  Fly   751 PASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEISRM--RKSLQKARFAARHSSHANQSQSD 813
                   ::..:.|.|..:|.:       ||.:...:.::  ..:|......|.....|....| 
  Fly   473 -------ERKAVKATKDSLLTS-------IKSLHTALGQIAPNMTLPSVDLIAHPLPEAPPKTS- 522

  Fly   814 DEDTLGGSPSKKRTRKRFNSSGVDMELGH------DDDDEEEDSDEDSMGEDTVSKDLLNSTQTP 872
             ..|....|....|.... ..||...|||      ..|.....|.....|:.:.|...:.:..:.
  Fly   523 -TPTPPQRPISVPTAAAL-KMGVGFPLGHLGPPGSKMDSSRMLSTHAKQGKHSTSSASVEAAPSV 585

  Fly   873 PCSPIKSLNNSSSPVGINRRTAILLTRKAQAALKR------------PSEPLTTPVKE-EQHNSQ 924
            .|             ||.:|:      |.|..|.:            .:.|||.|.|: :|:..|
  Fly   586 SC-------------GICKRS------KDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGWQ 631

  Fly   925 SSNTQSTSGSSSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSS 989
            .|.....|..|.:||.               :||.|..:.    |:.|..|.........:....
  Fly   632 CSECCDKSEGSDAVTE---------------ISSGPRKSR----TRFNKDGHLVYVDRYSLDDIP 677

  Fly   990 SAGTAAAASLTSTALAMNSKLSANLP------VKSPKRPGRYRRVPEVRHSSSMSPKKSP--NPA 1046
            .|....... :.|..|:|..|.|..|      .||||||            ...||.|:|  .||
  Fly   678 VAAVNVPKE-SHTKRALNKSLPAPAPEYIEDLTKSPKRP------------KLQSPCKTPINVPA 729

  Fly  1047 VTVSQALPMPETLPFERIPDSFRVYRANNQRDVSDSDDAPSQSSS-PCSSCSDFSMSGSCSDFDS 1110
            ..|:   |..:..|                  |:.|...|:.:.: |..:....::|| |.|   
  Fly   730 ENVT---PTTDAAP------------------VAASAATPAAAPTLPTPNTIVINLSG-CED--- 769

  Fly  1111 DEASEGDADGDPDRDGGRSRSEERDSTSQEGTTDAMDMQHASLNNVQGNNGNMAISS----SSGG 1171
               |..|:.|...|.|.|....:........|..::..:|   ...:....::..||    ::|.
  Fly   770 ---SIDDSSGKLSRKGKRKDKHKNKHNLSSDTEKSIGKEH---KRKRKKRAHLDESSTHLDNAGN 828

  Fly  1172 SGGSSSE----------DDELEERPLSARQNKPMKVGTRGTPTPT------------TMARAVAL 1214
            :.||:.:          :|..|.:......|....|.....||..            .:|..|..
  Fly   829 TSGSTIKIIFKALRLPGEDAPESQYFYVPANAVRSVDEASRPTSVETVEDSVQGAEQALAPIVLP 893

  Fly  1215 SAGRGRGKRRSNLSESTSSTATPPPLRRAGKLRSATPN----ASPLVNNIKARRNTTAAGSAPLT 1275
            :|...:.:.....:.|.|...||.|.|:... |.|:|.    ..|.|:|.|.....:....:...
  Fly   894 AASPQKVREPKETAASASVNPTPSPKRKVSP-RKASPRKPRVGRPRVSNAKPNVEISCCVCSQTG 957

  Fly  1276 NNNRSKHSEDSASSERHNNHSHGQKPALEPLQLVWAKCRGYPWYPALILDPKTPKGFVYNGVPLP 1340
            .:|:....::.        |.|.....|:|......|.|||.|:.|                  .
  Fly   958 KSNQVVTCDEC--------HRHYHFACLDPPLKKSPKIRGYSWHCA------------------D 996

  Fly  1341 APPTDVLALRK 1351
            ..|||..||.|
  Fly   997 CDPTDEDALPK 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484 13/54 (24%)
PHD_BRPF 283..336 CDD:277047 19/68 (28%)
ePHD_BRPF 340..456 CDD:277140 43/120 (36%)
Bromo_brd1_like 615..712 CDD:99944 16/101 (16%)
BR140_related 1303..1414 CDD:99900 14/49 (29%)
CG15439NP_608836.1 PHD1_PHF14 120..175 CDD:277036 18/60 (30%)
ePHD_PHF14 184..297 CDD:277144 43/120 (36%)
PHD2_PHF14 586..635 CDD:277037 15/67 (22%)
PHD3_PHF14 949..997 CDD:277038 11/73 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464534
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D566217at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13793
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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