DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and jade3

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_970614.2 Gene:jade3 / 322209 ZFINID:ZDB-GENE-030131-928 Length:795 Species:Danio rerio


Alignment Length:897 Identity:241/897 - (26%)
Similarity:371/897 - (41%) Gaps:203/897 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RNGCSSASAGGGSAS-GVSARQY-ANPESLVSYNEEEATVTFNLDGKSVRLGIDDALPL-----V 151
            |...||.|:...|.| ..|:.:| :.|.:..|..::.|.|        .|..:..|:.|     :
Zfish     5 RTPSSSDSSDNESPSTSFSSNKYGSKPGTPASAQKKPAEV--------FRKDLISAMKLPDSHHI 61

  Fly   152 EDEEFAALVARGCILNADAPPLEENAPWAR-VQVPVARVAEI--PDYRVSDAPPRPLAY---YRF 210
            ..|::..|        ||....|    |.: ||| :|....|  |..|:....|:.:.:   .::
Zfish    62 SSEDYYLL--------ADTWKQE----WEKGVQV-LASPDTIPQPSVRIITEKPKEVLFSKPRKY 113

  Fly   211 IE-----------KSLEEL-DGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTMELLMDRLEK 263
            |:           .:::|| :....||:|:.|..||:.:|.|...:|...|...|||.:|:.||:
Zfish   114 IQCWSQDSTETGYVNIKELAEAMCRYDLDDMDLYWLQQLNAELGMMGDGVVDELTMERVMEALER 178

  Fly   264 ESH---FQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQW 325
            :.|   ..|.......|:|.|:|.:|.:|...:.:..|.::|||.||:.|||.|||:..:|:|.|
Zfish   179 QCHENMNHAIETEEGLGIEYDEDVICDVCRSPDSEEGNDMVFCDKCNICVHQACYGIVKVPDGNW 243

  Fly   326 LCRRCLQSPSKPVNCVLCPNAGGAFKQTDHG-QWAHVVCALWIPEVRFANTVFLEPIDSIETIPP 389
            |||.|:...:.  .|:|||..|||.|.|..| :||||.||||||||..|....:|||..:..|||
Zfish   244 LCRTCVLGITP--QCLLCPKTGGAMKATRAGTKWAHVSCALWIPEVSIACPERMEPITKVSHIPP 306

  Fly   390 ARWRLTCYVCKEKGLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCH 454
            :||.|.|.:||.| .||||||...:|...||||||.:..|  .|.|:.|..::    |:..:||.
Zfish   307 SRWSLICSLCKLK-TGACIQCSVKNCTIPFHVTCAFEHSL--EMKTILDEGDE----VKFKSYCL 364

  Fly   455 AHTPADAKLKMNVPDFEDTRHKMKEARKAL---AKKRSTAPVVLIPTIPPDRVQEIATMVTMQRK 516
            .|    :|.|...|.....|||.......|   |:|...........:.|:.|..     .:...
Zfish   365 KH----SKPKAGEPGLSPARHKPPTETDKLSLRAQKLQELEEEFYTYVHPEEVAH-----DLSLP 420

  Fly   517 KEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGELYRQLKYWQCLRQDL 581
            ...||.|..||.:||.......||...:.:.|.  ::|       |....::.:::.:..|||||
Zfish   421 LHLLDFIFQYWKMKRKSNFNKALLPPKEDEENL--LLQ-------PQEDSIHTRMRMFMHLRQDL 476

  Fly   582 ERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARDSMQIFREPVDTSEVP 646
            ||.|.||.:|.:|||||::..:..|::..|.:..:...|:..|....:.::: :|..|      |
Zfish   477 ERVRNLCYMVSRREKLKLSQSKAQEQIFNLHVKLVNQELSAGLPVSSSIENL-LFHPP------P 534

  Fly   647 DYTDIVKQP-MDLGTMRAKLKE-----CQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGIRMR 705
            ..|..:|.| :.||..::..|.     |..||              |..|:..:     .||   
Zfish   535 RITLKLKMPKVQLGNGKSSSKSGNGPLCPDNS--------------CNLYDTSE-----GGI--- 577

  Fly   706 DQAAPLFVQVRKELQR--DGLLARSQRYHVD-----------------HV-------------EA 738
            .|..|.....|:.::.  :|:|..|.....|                 |.             ||
Zfish   578 GQGKPQLHLGRQRIEERINGILPASIYIRRDGGTPPLAVKQSGKPLALHAALHGQSSNGKTKNEA 642

  Fly   739 EVEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKARFAARH 803
            |..::::       |.||:.|.::..|.|.:..:.       |..|.|||  .|| |.:.|....
Zfish   643 EKTRQIK-------SNGILDKPILQRDTSCLAASE-------KDPRSEIS--GKS-QPSGFHKTS 690

  Fly   804 SSHANQS---------QSDDEDTLGGSPSKKRTRKRFNSSGVDMEL----------------GHD 843
            ..|.::|         :::|..|.     :|.:||   |||....|                |:.
Zfish   691 LEHFSRSLKEATVSLVRTEDLRTF-----EKNSRK---SSGFSKPLSTERPQGGGRASQESDGYC 747

  Fly   844 DDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRRTAI 895
            .|.|..||:.::.|:....    ..||......:||.:.:....|  .||::
Zfish   748 PDAELSDSEPEAKGKCRQG----GRTQNQRGDYVKSASRAKHSYG--SRTSV 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484 23/88 (26%)
PHD_BRPF 283..336 CDD:277047 22/52 (42%)
ePHD_BRPF 340..456 CDD:277140 56/116 (48%)
Bromo_brd1_like 615..712 CDD:99944 20/102 (20%)
BR140_related 1303..1414 CDD:99900
jade3NP_970614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 10/35 (29%)
EPL1 <89..178 CDD:287484 22/88 (25%)
COG5141 139..555 CDD:227470 151/449 (34%)
PHD_JADE3 203..252 CDD:277151 21/48 (44%)
ePHD_JADE3 256..366 CDD:277176 56/116 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..654 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 667..687 8/29 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 714..795 20/94 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1726
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

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