DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and Jade2

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_038941852.1 Gene:Jade2 / 303113 RGDID:1309152 Length:901 Species:Rattus norvegicus


Alignment Length:1160 Identity:276/1160 - (23%)
Similarity:395/1160 - (34%) Gaps:418/1160 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQPLTP----------VLTPSRKKARSR----SGGHHSTPRPHKDHPTPGG-------GGAEARN 95
            |:|..|          :..|:...||||    ||||.....| .:|.:|.|       ||.|...
  Rat     4 PRPPAPAPGAPGFRSILPAPAPAAARSRGQRPSGGHRGARAP-GEHTSPPGPPVPSSLGGLELAE 67

  Fly    96 ---------------GCSSASAGGGSASGVSARQYAN-PESLVS----YNEEEATVTFNLDGKSV 140
                           ...::....|..:..||.:.:. |.|..|    .||::.:..|..| ...
  Rat    68 QSTKQMEEKRRKYSISSDNSDTTDGHVTSTSASRCSKLPSSTKSGWPRQNEKKPSEVFRTD-LIT 131

  Fly   141 RLGIDDALPLVEDEEFAALVARGCILNADAPPLEENAPWAR-----VQVPVARVAEIPDYRVSDA 200
            .:.|.|:..|..|:.:         :.||        ||.:     ||||....| ||:..|...
  Rat   132 AMKIPDSYQLSPDDYY---------ILAD--------PWRQEWEKGVQVPAGAEA-IPEPVVRIL 178

  Fly   201 PP-----------RPLAYYRFIEKSLEELDGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTM 254
            ||           .|    ...|.:..:..|...||:||.|:.|||.:|.|.:.:....:...|:
  Rat   179 PPLKGPPTLMSPESP----TLGEGAHPDWPGGSRYDLDEIDAYWLELLNSELKEMEKPELDELTL 239

  Fly   255 ELLMDRLEKESH---FQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYG 316
            |.:::.||...|   .||.......|:|.|:|.||.:|...|.::.|.::|||.||:.|||.|||
  Rat   240 ERVLEELETLCHQNMAQAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYG 304

  Fly   317 VPYIPEGQWLCRRCLQSPSKPVNCVLCPNAGGAFKQTDHG-QWAHVVCALWIPEVRFANTVFLEP 380
            :..:|.|.||||.|......  .|:|||..|||.|.|..| :|.||.||||||||.......:||
  Rat   305 ILKVPTGSWLCRTCALGVQP--KCLLCPKRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEP 367

  Fly   381 IDSIETIPPARWRLTCYVCKEKGLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSM 445
            |..|..||.:||.|:|.:||| ..|.||||...||..|||||||...||  .|.|:. ..||   
  Rat   368 ITKISHIPASRWALSCSLCKE-CTGTCIQCSTPSCLTAFHVTCAFDRGL--EMRTIL-ADND--- 425

  Fly   446 HVQKFAYCHAHTPADAKLKMNVPDFEDTRHKMKEARKALAKKRSTAPVV--LIPTIPPDRVQEIA 508
            .|:..:.|..|:....:.:.:....|.:: .:::..|...:|:....:.  ....:.|..|.|  
  Rat   426 EVKFKSLCQEHSDGGPRSEPSSEPVEPSQ-AVEDLEKVTLRKQRLQQLEENFYELVEPAEVAE-- 487

  Fly   509 TMVTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGE------- 566
               .:...:..:|.|..||.|||......|||                    :|.|.|       
  Rat   488 ---RLDLAEALVDFIYQYWKLKRRANANQPLL--------------------TPKTDEVDNLAQQ 529

  Fly   567 ----LYRQLKYWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDAL 627
                |||:||.:..|||||||.|.||.:|.:||:.|....::.|::..||:              
  Rat   530 EQDVLYRRLKLFTHLRQDLERVRNLCYMVTRRERTKHTICKLQEQIFHLQM-------------- 580

  Fly   628 EARDSMQIFREPVDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNN 692
                                                ||                           
  Rat   581 ------------------------------------KL--------------------------- 582

  Fly   693 KDTVFYRAGIRMRDQAAPLFVQVRKELQRDGLLARSQRYHVDHVEAEVEQELRLLLAAPASEGIV 757
                                                           :||:|             
  Rat   583 -----------------------------------------------IEQDL------------- 587

  Fly   758 QKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKARFAARHSSHANQSQSDDEDTLGGSP 822
                        .:.|:.|..|.|:        ..|.:|.|                |...|.||
  Rat   588 ------------CREPSGRRSKGKK--------NDSKRKGR----------------EGPKGSSP 616

  Fly   823 SKKRTRKR---------------------FNS--------SGVDMEL-------GHDDD------ 845
            .||...|.                     |||        :..||.:       ||.:|      
  Rat   617 EKKEKMKAGPESVLGQLGLSTSFPIDGTFFNSWLAQSVQITAEDMAMSEWSLNSGHREDPAPGLL 681

  Fly   846 DEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRRTAILLTRKAQAALKRPSE 910
            .||...||::         ||:..:.|...|       ..|           .|||:...:.|::
  Rat   682 SEELLQDEET---------LLSFMRDPSLRP-------GDP-----------ARKARGRTRLPAK 719

  Fly   911 PLTTPVKEEQHNSQSSNTQSTSGSSSSVTTAATA----ASSGAGTLNHVLSSAPPTASSFALTQN 971
            ....|:::              |.|:..|....|    |..|.||.... :..||..:|..|..:
  Rat   720 KKPPPLQD--------------GPSARTTPEKPAKKAWAQDGKGTQGPP-ARKPPRRTSSHLPSS 769

  Fly   972 NSSGGGALASGTGIGGSSSAGTAAAASLTSTALAMNSKLSANL--PVKSPKRPGRYRRVPEVRHS 1034
            .::|...:.:..     .|..|.|:..|..|..|. |.|:..:  |..|||..||.|...|::.|
  Rat   770 PAAGDCPVPATL-----ESPPTLASEILDETVPAA-SDLNVQVPGPTVSPKPLGRLRPPREMKVS 828

  Fly  1035 SSMSPKKSPNPAVTVSQALP-----MPE-TLPFERIPDSFRVYRANNQRDVSDSD 1083
                 :|||.........||     .|: :|.|:...|.:     .:..::||||
  Rat   829 -----RKSPGARSDAGTGLPSTVAERPKVSLHFDTEADGY-----FSDEEMSDSD 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516 3/18 (17%)
COG5141 203..>625 CDD:227470 145/438 (33%)
Bromo_brd1_like 615..712 CDD:99944 2/96 (2%)
MSCRAMM_ClfA <1080..1163 CDD:468110 4/4 (100%)
PWWP_BRPF 1303..1414 CDD:438964
Jade2XP_038941852.1 COG5141 209..>578 CDD:227470 140/403 (35%)
PHD_SF 326..436 CDD:473978 56/116 (48%)
PHA03247 <676..852 CDD:223021 50/228 (22%)
Blue background indicates that the domain is not in the aligned region.

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