DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and Brd1

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001028446.2 Gene:Brd1 / 223770 MGIID:1924161 Length:1189 Species:Mus musculus


Alignment Length:1429 Identity:498/1429 - (34%)
Similarity:686/1429 - (48%) Gaps:347/1429 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RNG-CSSASAGGGSASGVSARQYANPESLVSYNEEEATVTFNLDGKSVRLGIDDALPLVEDEEFA 157
            |.| |...||....:|..|.:.....|:| :|.:.:..|...::|:..|:.|.|.|.::.:::..
Mouse     3 RKGRCHRGSAARHPSSPCSIKHSPTRETL-TYAQAQRMVEIEIEGRLHRISIFDPLEIILEDDLT 66

  Fly   158 ALVARGCIL---NADAPPL---------------------EENAPWARVQVPVARVAEIPDYRVS 198
            |.....|..   |::.||:                     ....|.:...:|..:| .|.:|...
Mouse    67 AQEMSECNSNKENSERPPVCLRTKRHKNNRVKKKNEVLPSTHGTPASASALPEPKV-RIVEYSPP 130

  Fly   199 DAPPRPLAYYRFIEKSLEELDGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTMELLMDRLEK 263
            .||.||..||:|||||.||||.|||||:||||.||||.:||:|:...::||..:..|.||||.||
Mouse   131 SAPRRPPVYYKFIEKSAEELDNEVEYDMDEEDYAWLEIINEKRKGDCVSAVSQNMFEFLMDRFEK 195

  Fly   264 ESHFQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCR 328
            ||:.:....|....: :|:|||||||:||||||:|||||||||||||||:|||||||||||||||
Mouse   196 ESYCENQKQGEQQSL-IDEDAVCCICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCR 259

  Fly   329 RCLQSPSKPVNCVLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWR 393
            .||||.::|.:||||||.|||||:||..:|.|||||||||||.||||||:||||.:..||||||:
Mouse   260 HCLQSRARPADCVLCPNKGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWK 324

  Fly   394 LTCYVCKEKGLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKD-GHNDSSMHVQKFAYCHAHT 457
            ||||:||:||:|||||||:.:||.||||||||:|||||.|:.||: ....::..|:|.|||..||
Mouse   325 LTCYLCKQKGVGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGSATFSVRKTAYCDVHT 389

  Fly   458 P-----------ADAKLKMNVPDFEDT----------RHKMKEARKALAKKRSTAPVVLIPTIPP 501
            |           .|.::|..|...|.:          |.|.|:|:|.||:..:..|.|..|.|||
Mouse   390 PPGCTRRPLNIYGDVEMKNGVCRKESSVKTVRSTSKVRKKAKKAKKTLAEPCAVLPTVCAPYIPP 454

  Fly   502 DRVQEIATMVTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGE 566
            .|:..||..|.:||||:|::|..:||.|||..|||.||||||||...:....|:.  |...:...
Mouse   455 QRLNRIANQVAIQRKKQFVERAHSYWLLKRLSRNGAPLLRRLQSSLQSQRNTQQR--ENDEEMKA 517

  Fly   567 LYRQLKYWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARD 631
            ...:|||||.||.||||||||.||:|||||||...|::.:..:.|:|.||...|..:|:.|:.:|
Mouse   518 AKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQMAMELRLTPLTVLLRSVLEQLQEKD 582

  Fly   632 SMQIFREPVDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTV 696
            ..:||.:||...|||||.|.:|.|||..|||.:|:...|.:|...|.||:|::.||:.||.||||
Mouse   583 PAKIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTV 647

  Fly   697 FYRAGIRMRDQAAPLFVQVRKELQR----------------------------DGLLARSQRYHV 733
            ||||.:|:|||...:..|.|:|::.                            |.||..:.|.|:
Mouse   648 FYRAAVRLRDQGGVVLRQARREVESIGLEEASGMHLPERPIAAPRRPFSWEEVDRLLDPANRAHM 712

  Fly   734 DHVEAEVEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKAR 798
                 .:|::||.||         .||    |.:..:|:...|:|:.|.::.||:.:|..|    
Mouse   713 -----SLEEQLRELL---------DKL----DLTCSMKSSGSRSKRAKLLKKEIALLRNKL---- 755

  Fly   799 FAARHSSHANQSQSDDEDTLGGSPSKKRTRKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSK 863
                     :|..|....|..|:.                  |.:|                   
Mouse   756 ---------SQQHSQAPPTGAGTG------------------GFED------------------- 774

  Fly   864 DLLNSTQTPPCSPIKSLNNSSSPVGINRRTAILLTRKAQAALKRPSEPLT-TPVKEEQHNSQSSN 927
                  :..|.:|..:...::||..:....|:.|...::.    .|||.| .||  |.|..||..
Mouse   775 ------EAAPLAPDTAEEGANSPPKLEPSDALPLPSNSET----NSEPPTLNPV--ELHPEQSKL 827

  Fly   928 TQSTSGSSSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSSSAG 992
            .:..:..:.|.:|...:|         ::|..||..:              |||      |....
Mouse   828 FKRVTFDNESHSTCTQSA---------LVSGHPPEPT--------------LAS------SGDVP 863

  Fly   993 TAAAASLTSTALAMNSKLSANLPVKSPKRPGRYRRVPEVRHSSSMSPKKSPNPAVT--------- 1048
            .|||:::...:..:|.:.|. |..|                |.|:||.||.....|         
Mouse   864 AAAASAVAEPSSDVNRRTSV-LFCK----------------SKSVSPPKSAKNTETQPTSPQLGT 911

  Fly  1049 ---VSQALPMPETL--PFERIPDSFRVYRANNQRDVSDSDDAPSQSSSPCSSCSDFSMSGSCSDF 1108
               :|..||..|||  |.:|                       |:|              :|.|.
Mouse   912 KTFLSVVLPRLETLLQPRKR-----------------------SRS--------------TCGDS 939

  Fly  1109 DSDEASEGD-ADGDPDRDGGRSRSEERDSTSQEGTTDAMDMQHASLNNVQGNNGNMAISSSSGGS 1172
            :.:|.|.|. .|.......|.:|||:                                 ...||.
Mouse   940 EVEEESPGKRLDTGLTNGFGGARSEQ---------------------------------EPGGGP 971

  Fly  1173 GGSSSEDDELEERPLSARQNKPMKVGTRGTPTPTTMARAVALSAGRGRGKRRSNLSESTSSTATP 1237
            |..::..............|.|:...:..||           ..|||:                 
Mouse   972 GRKAAPRRRCASESSICSSNSPLCDSSFSTP-----------KCGRGK----------------- 1008

  Fly  1238 PPLRRAGKLRSATPNASPLVNNIKARRNTTAAGSAPLTNNNRSKHSEDSASSERHNNHSHGQKPA 1302
            |.|.|    |....:.|.|::.|:......||..|.....:....|.|:|:|            .
Mouse  1009 PALVR----RHTLEDRSELISCIENGNYAKAARIAAEVGQSNMWISTDAAAS------------V 1057

  Fly  1303 LEPLQLVWAKCRGYPWYPALILDPKTPK--GFVYNGVPLPAPPTDVLALRKNC---LDEIVFLVL 1362
            ||||::|||||.|||.|||||:|||.|:  |. :|||.:||||.|||.:.::.   .:|.:||||
Mouse  1058 LEPLKVVWAKCSGYPSYPALIIDPKMPRVPGH-HNGVTIPAPPLDVLKIGEHMQTKSEEKLFLVL 1121

  Fly  1363 FFDVKRTWQWLPANKLDILGIDKQLDQQKLVESRKPAERKAVKKAYQDALHYQSQV-----SDL 1421
            |||.||:|||||.:|:..||:|:.:|:.|::|.|..:.||||:.|:..|:::.|:|     |||
Mouse  1122 FFDNKRSWQWLPKSKMVPLGVDETIDKLKMMEGRNSSIRKAVRIAFDRAMNHLSRVHGEPASDL 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 247/443 (56%)
Bromo_brd1_like 615..712 CDD:99944 46/96 (48%)
MSCRAMM_ClfA <1080..1163 CDD:468110 12/83 (14%)
PWWP_BRPF 1303..1414 CDD:438964 61/115 (53%)
Brd1NP_001028446.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 7/21 (33%)
Interaction with KAT7/HBO1 and histones. /evidence=ECO:0000250|UniProtKB:O95696 31..80 10/49 (20%)
EPL1 47..196 CDD:463128 53/149 (36%)
COG5141 139..>572 CDD:227470 244/435 (56%)
ePHD_BRPF2 271..388 CDD:277172 79/116 (68%)
Bromo_brd1_like 566..663 CDD:99944 46/96 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..776 7/77 (9%)
PWWP_BRPF2 1058..1177 CDD:438985 62/119 (52%)
Blue background indicates that the domain is not in the aligned region.

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