DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and zfp-1

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001379957.1 Gene:zfp-1 / 176237 WormBaseID:WBGene00006975 Length:867 Species:Caenorhabditis elegans


Alignment Length:959 Identity:206/959 - (21%)
Similarity:353/959 - (36%) Gaps:288/959 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 CCICLDGECQNTNVILFCD--MCNLAVHQDCYGVPYIPEGQWLCRRCLQSPSK---PVN-----C 340
            ||:|.|......|.:::||  .|.:||||.|||:..:|||:|.|.:|.::.:.   .:|     |
 Worm     8 CCVCADENGWTDNPLIYCDGENCEVAVHQGCYGIQEVPEGEWFCAKC
TKASAMMPGSINEATFCC 72

  Fly   341 VLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEK--- 402
            .|||...||.|:||...||||:|||:||||||.|...:||: .:..:|..::...||:|.|:   
 Worm    73 QLCPFDYGALKKTDRNGWAHVICALYIPEVRFGNVHSMEPV-ILNDVPTDKFNKLCYICNEERPN 136

  Fly   403 --GLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCHAHTPA---DAK 462
              ..|||:.|::::|..:|||||||:.||......:       |.:|:...||..|...   |..
 Worm   137 DAKKGACMSCNKSTCKRSFHVTCAQRKGLLCEEGAI-------SRNVKYCGYCENHLKKAINDPA 194

  Fly   463 LKMNVPDFEDTRHKMKEARKALAKKRSTAPVVLIPTIPP-DRVQEIATMVTMQRKKEFLDRIIAY 526
            :|: :|.....:...||     ..|:.|..:..:|..|| .|:..:|..:.::..|  ::.::..
 Worm   195 IKV-IPACPPVQRLSKE-----QDKKKTVLLTSLPLPPPAPRLHMLADPLPIKSNK--VNNVLGL 251

  Fly   527 WTLKRHYRNGVPLLRRLQSQGN-NHGV-----------------------------IQRNGIEGS 561
            .:.    .|.|.|..|..|... |.|:                             |.:|.:..|
 Worm   252 GSA----INAVSLEERPASGSTVNSGIFVPPPTAFSPPLTTSSRSSVAQDPSPPLTINKNSLSSS 312

  Fly   562 ----PDTGELYRQLKY--------------------WQCLRQ-DLERARLLCELVRKREKLKVAF 601
                |.|..|......                    ..||:| .::.|              .|.
 Worm   313 GPLIPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSA--------------AAA 363

  Fly   602 VRISEEVVMLQLN--PLEAALNKLLDALEARDSMQIFREPVDTSEVP------------DYTDIV 652
            .....::...:||  |..:.|:..:..:.||::..:      .|.:|            |....|
 Worm   364 AITQNQIGPSELNGYPAASQLSSFMHEIPARNTTSV------ASLLPPGAAEYHLNGSGDEEKTV 422

  Fly   653 KQPMDLGTMRAK-LKECQYNSLE------QLEADFDLMIQNCLAYNNKDTVFYRAGI-RMRDQAA 709
            |..:.....:|| :::.:.:.::      :..|....::.:..:.::..||.....: |:::..|
 Worm   423 KAVLTAPLTKAKRIRDSKNDMMDKTHKRPRANARPPAVLGSMSSGSSGGTVGKSPSMQRLQNLVA 487

  Fly   710 PLFVQVRKELQRD-----------GLLARSQ-----------------RYHVDHVEAEVEQELRL 746
            |:..:...:.|||           ...|:||                 ..|.:...:...|...|
 Worm   488 PIVSETVTDFQRDRVADRTAAERRAAAAQSQPSTSTNGGPNVTIPAVVEVHTNSTNSTNHQNNGL 552

  Fly   747 LLAAPAS----------EGIV-QKLLILADKSQVLKNPTYRTKKIK------------------- 781
            ...||||          :|:: |.......:|..|..|::..:.::                   
 Worm   553 TQNAPASTSMQAGTSSNDGVISQNGTSSTSQSNRLNLPSFMEQLLERQWDQGSSLLMANAHFDVA 617

  Fly   782 -------QIRLEISRMRKSLQKARFAARHSSHANQSQSDDEDTLGGSPSKKRTRKRFNSSG--VD 837
                   |::.|..|:.::|...|....|....| |:..:.:||..|       ||..|.|  :.
 Worm   618 QLLSCLFQLKSENFRLEENLSGLRKRRDHLFALN-SRLAEVNTLDVS-------KRQRSDGLLLQ 674

  Fly   838 MELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRRTAI---LLTR 899
            .::.|..|.           ...|.|..::. |.|..:|      :|.|:..|..:::   :...
 Worm   675 QQIAHHLDP-----------TSIVPKAEVHK-QEPLSAP------TSVPLPANHSSSLFEDIKAP 721

  Fly   900 KAQAALKRPSE-PLTTPVKEEQHNSQSSNTQSTSGSSSSVTTAATAASSGAGTLNHVLSSAPPTA 963
            ||..:.|.||. |||.|:                .::::..|..|||||||           |..
 Worm   722 KATYSRKTPSNIPLTVPL----------------STAATALTTTTAASSGA-----------PVN 759

  Fly   964 SSFALTQNNSSGGGALASGTGIGGSSSAGTAAAASLTSTALAMNSKLSANLPVKSPKRPGRYRRV 1028
            |:.   ||:.:            ..|:||...||:...||:...::|:|..|.::......||..
 Worm   760 SNI---QNHRA------------TPSTAGAPMAATPIMTAVTSANELAALSPERAQALLNMYRMP 809

  Fly  1029 PEVRHSSSMS-----PKKSPNP-------AVTVSQALPMPETLPFERIP 1065
            .:...::.:|     |.: .||       ||.:......|...|...:|
 Worm   810 LDANVAAQLSMITNFPGQ-VNPSLFSRLLAVNMMNGGLQPNGQPLSALP 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484
PHD_BRPF 283..336 CDD:277047 21/51 (41%)
ePHD_BRPF 340..456 CDD:277140 48/120 (40%)
Bromo_brd1_like 615..712 CDD:99944 17/116 (15%)
BR140_related 1303..1414 CDD:99900
zfp-1NP_001379957.1 PHD_AF10_AF17 7..54 CDD:277049 20/45 (44%)
ePHD_AF10_like 72..185 CDD:277142 48/120 (40%)
CC_AF10 593..654 CDD:411015 8/61 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D566217at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1726
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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