DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and zfp-1

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_001379957.1 Gene:zfp-1 / 176237 WormBaseID:WBGene00006975 Length:867 Species:Caenorhabditis elegans


Alignment Length:959 Identity:206/959 - (21%)
Similarity:353/959 - (36%) Gaps:288/959 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 CCICLDGECQNTNVILFCD--MCNLAVHQDCYGVPYIPEGQWLCRRCLQSPSK---PVN-----C 340
            ||:|.|......|.:::||  .|.:||||.|||:..:|||:|.|.:|.::.:.   .:|     |
 Worm     8 CCVCADENGWTDNPLIYCDGENCEVAVHQGCYGIQEVPEGEWFCAKCTKASAMMPGSINEATFCC 72

  Fly   341 VLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEK--- 402
            .|||...||.|:||...||||:|||:||||||.|...:||: .:..:|..::...||:|.|:   
 Worm    73 QLCPFDYGALKKTDRNGWAHVICALYIPEVRFGNVHSMEPV-ILNDVPTDKFNKLCYICNEERPN 136

  Fly   403 --GLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQKFAYCHAHTPA---DAK 462
              ..|||:.|::::|..:|||||||:.||......:       |.:|:...||..|...   |..
 Worm   137 DAKKGACMSCNKSTCKRSFHVTCAQRKGLLCEEGAI-------SRNVKYCGYCENHLKKAINDPA 194

  Fly   463 LKMNVPDFEDTRHKMKEARKALAKKRSTAPVVLIPTIPP-DRVQEIATMVTMQRKKEFLDRIIAY 526
            :|: :|.....:...||     ..|:.|..:..:|..|| .|:..:|..:.::..|  ::.::..
 Worm   195 IKV-IPACPPVQRLSKE-----QDKKKTVLLTSLPLPPPAPRLHMLADPLPIKSNK--VNNVLGL 251

  Fly   527 WTLKRHYRNGVPLLRRLQSQGN-NHGV-----------------------------IQRNGIEGS 561
            .:.    .|.|.|..|..|... |.|:                             |.:|.:..|
 Worm   252 GSA----INAVSLEERPASGSTVNSGIFVPPPTAFSPPLTTSSRSSVAQDPSPPLTINKNSLSSS 312

  Fly   562 ----PDTGELYRQLKY--------------------WQCLRQ-DLERARLLCELVRKREKLKVAF 601
                |.|..|......                    ..||:| .::.|              .|.
 Worm   313 GPLIPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSA--------------AAA 363

  Fly   602 VRISEEVVMLQLN--PLEAALNKLLDALEARDSMQIFREPVDTSEVP------------DYTDIV 652
            .....::...:||  |..:.|:..:..:.||::..:      .|.:|            |....|
 Worm   364 AITQNQIGPSELNGYPAASQLSSFMHEIPARNTTSV------ASLLPPGAAEYHLNGSGDEEKTV 422

  Fly   653 KQPMDLGTMRAK-LKECQYNSLE------QLEADFDLMIQNCLAYNNKDTVFYRAGI-RMRDQAA 709
            |..:.....:|| :::.:.:.::      :..|....::.:..:.::..||.....: |:::..|
 Worm   423 KAVLTAPLTKAKRIRDSKNDMMDKTHKRPRANARPPAVLGSMSSGSSGGTVGKSPSMQRLQNLVA 487

  Fly   710 PLFVQVRKELQRD-----------GLLARSQ-----------------RYHVDHVEAEVEQELRL 746
            |:..:...:.|||           ...|:||                 ..|.:...:...|...|
 Worm   488 PIVSETVTDFQRDRVADRTAAERRAAAAQSQPSTSTNGGPNVTIPAVVEVHTNSTNSTNHQNNGL 552

  Fly   747 LLAAPAS----------EGIV-QKLLILADKSQVLKNPTYRTKKIK------------------- 781
            ...||||          :|:: |.......:|..|..|::..:.::                   
 Worm   553 TQNAPASTSMQAGTSSNDGVISQNGTSSTSQSNRLNLPSFMEQLLERQWDQGSSLLMANAHFDVA 617

  Fly   782 -------QIRLEISRMRKSLQKARFAARHSSHANQSQSDDEDTLGGSPSKKRTRKRFNSSG--VD 837
                   |::.|..|:.::|...|....|....| |:..:.:||..|       ||..|.|  :.
 Worm   618 QLLSCLFQLKSENFRLEENLSGLRKRRDHLFALN-SRLAEVNTLDVS-------KRQRSDGLLLQ 674

  Fly   838 MELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRRTAI---LLTR 899
            .::.|..|.           ...|.|..::. |.|..:|      :|.|:..|..:::   :...
 Worm   675 QQIAHHLDP-----------TSIVPKAEVHK-QEPLSAP------TSVPLPANHSSSLFEDIKAP 721

  Fly   900 KAQAALKRPSE-PLTTPVKEEQHNSQSSNTQSTSGSSSSVTTAATAASSGAGTLNHVLSSAPPTA 963
            ||..:.|.||. |||.|:                .::::..|..|||||||           |..
 Worm   722 KATYSRKTPSNIPLTVPL----------------STAATALTTTTAASSGA-----------PVN 759

  Fly   964 SSFALTQNNSSGGGALASGTGIGGSSSAGTAAAASLTSTALAMNSKLSANLPVKSPKRPGRYRRV 1028
            |:.   ||:.:            ..|:||...||:...||:...::|:|..|.::......||..
 Worm   760 SNI---QNHRA------------TPSTAGAPMAATPIMTAVTSANELAALSPERAQALLNMYRMP 809

  Fly  1029 PEVRHSSSMS-----PKKSPNP-------AVTVSQALPMPETLPFERIP 1065
            .:...::.:|     |.: .||       ||.:......|...|...:|
 Worm   810 LDANVAAQLSMITNFPGQ-VNPSLFSRLLAVNMMNGGLQPNGQPLSALP 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516
COG5141 203..>625 CDD:227470 106/414 (26%)
Bromo_brd1_like 615..712 CDD:99944 17/116 (15%)
MSCRAMM_ClfA <1080..1163 CDD:468110
PWWP_BRPF 1303..1414 CDD:438964
zfp-1NP_001379957.1 PHD_AF10_AF17 7..54 CDD:277049 20/45 (44%)
ePHD_AF10_like 72..185 CDD:277142 48/120 (40%)
CC_AF10 593..654 CDD:411015 8/61 (13%)
Blue background indicates that the domain is not in the aligned region.

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