DRSC/TRiP Functional Genomics Resources

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Protein Alignment Br140 and brpf3a

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_005169382.1 Gene:brpf3a / 100149254 ZFINID:ZDB-GENE-130530-730 Length:1214 Species:Danio rerio


Alignment Length:1486 Identity:481/1486 - (32%)
Similarity:679/1486 - (45%) Gaps:403/1486 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 RKKARSRSGG-----------HHSTPRPHKD------HPTPGGGGAEARNGCSSASAGGGSASGV 110
            ::.|:||:||           ....|..|.|      .|:|          |             
Zfish     6 KRVAQSRAGGFGRGLVREEDQDQVGPSSHVDMDALLCPPSP----------C------------- 47

  Fly   111 SARQYANPESLVSYNEEEATVTFNLDGKSVRLGIDDALPLVEDEEFAALVARGCILNADAPPLEE 175
             ...::.....::|.:.:..|...|:|:..|:.|.|.|.:|.::|..|.....|..|      :|
Zfish    48 -RLNFSPTRDTLTYAQAQRMVEIELEGRLHRINICDQLSVVTEDEMLAQDLTECNSN------KE 105

  Fly   176 NAPW----------------------------------ARVQVPVAR--VAEIPDYRVSDAPPRP 204
            |:..                                  |.:|.|:.:  ..::.::.||||||.|
Zfish   106 NSEQRQGNKQAASKSKKKDGKHTAKKKSGGQYGLQGQVAHLQAPLPKPTFRKLDNFTVSDAPPLP 170

  Fly   205 LAYYRFIEKSLEELDGEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTMELLMDRLEK----ES 265
            :||||::|||.||||.|.|||:||||.||||.:|::|...|..:|..||.|||:||||:    ||
Zfish   171 VAYYRYMEKSGEELDNEAEYDMDEEDMAWLEMVNQKRVSDGHASVPPDTFELLIDRLERESILES 235

  Fly   266 HFQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCRRC 330
            ..||.:..|     :|:||.||:|||.||.|:|||||||:|||||||:|||||||||||||||||
Zfish   236 RSQALSQST-----IDEDAYCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRC 295

  Fly   331 LQSPSKPVNCVLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLT 395
            |||||:||:||||||.|||||||..|.||||:||:|||||.|||||||||::.::.||||||:||
Zfish   296 LQSPSRPVDCVLCPNRGGAFKQTSDGSWAHVICAIWIPEVCFANTVFLEPVEGVKNIPPARWKLT 360

  Fly   396 CYVCKEKGLGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKD-GHNDSSMHVQKFAYCHAHTPA 459
            ||:||:||.||.||||:.:||.||||||||:|||||.:|.|:: |.|.::..|:|.|||..|:|.
Zfish   361 CYLCKQKGRGASIQCHKANCYRAFHVTCAQRAGLYMKIDPVRETGTNGTTFTVKKTAYCENHSPP 425

  Fly   460 DAKLKMNVPDFEDT--------------------------RHKMKEARKALAKKRS-------TA 491
            ..    ....:||.                          |.|...|::...:|.|       ..
Zfish   426 GT----GTEGYEDNGLVGGRGNRGQRSYTLGPPLQQNQNGRKKGSAAQQKKTQKNSGGGSRKTGV 486

  Fly   492 PVVLIPTIPPDRVQEIATMVTMQRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRN 556
            |::|:|.||..|:.:|.|.|:::||.:|:.|:..||.||||.||||||:|||.|    |...|::
Zfish   487 PLLLVPQIPSFRLNKICTGVSVERKNQFMQRLHNYWLLKRHSRNGVPLIRRLHS----HLQAQKS 547

  Fly   557 GIEGSPDT--GELYRQLKYWQCLRQDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAA 619
            . :..||.  ..:..:|||||.||||||:||||.||:||||:||...:::.:..:.|||.|....
Zfish   548 E-QREPDAKLQAVREELKYWQKLRQDLEKARLLIELIRKRERLKREQMKLQQAALELQLTPALVF 611

  Fly   620 LNKLLDALEARDSMQIFREPVDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMI 684
            |...|:.|:.:|:..||..||:..|||||.:.|..|||..||..||:..:|:|:..||.||:||:
Zfish   612 LRATLEQLKEKDTDHIFTTPVNLKEVPDYLEFVTVPMDFSTMHDKLEAHKYSSVADLENDFNLMV 676

  Fly   685 QNCLAYNNKDTVFYRAGIRMRDQAAPLFVQVRKELQRDGLLARSQRYHV--------------DH 735
            .|||.||:.||||::|.:::|:....:....:.:....| |..|...|:              |.
Zfish   677 SNCLRYNSNDTVFHKAAMQLREVGGAILRHAQHQALSIG-LDPSTGMHLPDKPIPHNTTVSWCDE 740

  Fly   736 VEAEVEQELRLLLAAPASEGIVQKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKARFA 800
            |:..::.:.|:.:.|   |..::.||...|....::....|||:::.:|.||:.:|..:      
Zfish   741 VDMLLDPDNRVHMCA---EDQLKTLLDKLDLVASMRTSGGRTKRMRLLRREINSLRHKI------ 796

  Fly   801 ARHSSHANQSQSDDEDTLGGSPSKKRTRKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDL 865
                ||    |..:...|.|...:::::                 |.:.:...|.:..:...|..
Zfish   797 ----SH----QDRNSRLLNGKIREEKSK-----------------DAKSEKKMDYITSEDPKKSA 836

  Fly   866 LNSTQTPPCSPIKSLNNSSSPVGINRRTAILLTRKAQAALKRPSEPL--------TTPVKEEQHN 922
            ....|.|.| |..|.....:|                     |:.||        |||.   |.|
Zfish   837 SQKAQEPAC-PASSPLPGDAP---------------------PNPPLFCLETGRTTTPA---QSN 876

  Fly   923 SQSSNTQSTSGSSSSVTTAATAASSGAGTLNHVLSSAPPTASSFALTQNNSS-GGGALASGTGIG 986
            ...|..|...|...|:..            ||  :..|....:|...:|:|| ....:.|.....
Zfish   877 KPGSRKQRAKGKDRSLRE------------NH--NQTPKEDENFHTKENDSSPQEDRVCSAKNQS 927

  Fly   987 GSSSAGTAAAASLTSTALAMNSKLSANLPVKSPKRPGRYRRVPEVRHSSSMSPKKSPNPAVTVSQ 1051
            .|...|.....|:........::.:.:.||..|....:.:.......::......:|.|   || 
Zfish   928 DSPKIGVGRRTSILFKKAKNGARPTKDKPVLLPNGVSKAQNGASQEQNTQAKAPSTPKP---VS- 988

  Fly  1052 ALPMPETLPFERIPDSFRVYRANNQRDVSDSDDAPSQSSSPCSSCSDFSMSGSCSDFDSDEASEG 1116
              |.|..|                             .|...|:|||               .||
Zfish   989 --PSPHQL-----------------------------RSRGLSTCSD---------------GEG 1007

  Fly  1117 -DADGDPDRDGGRSRSEERDSTSQEGTTDAMDMQHASLNNVQGNNGNMAISSSSGGSGGSSSEDD 1180
             .|:..|:.:|                         ..|.::.:|||.:.|.:|           
Zfish  1008 MKANSLPEENG-------------------------LTNGLKRHNGNSSDSENS----------- 1036

  Fly  1181 ELEERPLSARQNKPMKVGTRGTPT-PTTMARAVALSAGRGRGKRRSNLSESTSSTATPPPLRRAG 1244
                                 ||. ||                      .|:|     ||.|..|
Zfish  1037 ---------------------TPAFPT----------------------HSSS-----PPKRSRG 1053

  Fly  1245 KLRSATPNASPLVNNIKARRNTTAAGSAPLTNNNRSKHSEDSASSERHNNHSHGQKPALEPLQLV 1309
            |                     .|....|:   :..|:...:.:||...|...     :|||.||
Zfish  1054 K---------------------PALSKVPV---DEEKNEVTNTNSEASQNDGE-----MEPLTLV 1089

  Fly  1310 WAKCRGYPWYPALILDPKTP-KGFVYNGVPLPAPPTDVLAL---RKNCLDEIVFLVLFFDVKRTW 1370
            ||||||||.|||:|:|||.| :|.::||:|:|.||||||.|   |:...:|.:|||||||.||||
Zfish  1090 WAKCRGYPSYPAMIVDPKMPQEGILHNGIPIPVPPTDVLDLGKRRQEESEEKLFLVLFFDTKRTW 1154

  Fly  1371 QWLPANKLDILGIDKQLDQQKLVESRKPAERKAVKKAYQDALHYQSQVSDLEGQGP 1426
            ||||.:||..:|||..:|:.:|:|.:||..||:|..||..|:.:.|.|.:.....|
Zfish  1155 QWLPQDKLHHMGIDDTVDRLRLMEGKKPNVRKSVHTAYDRAMTHLSHVQENSSFNP 1210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484 43/75 (57%)
PHD_BRPF 283..336 CDD:277047 45/52 (87%)
ePHD_BRPF 340..456 CDD:277140 78/116 (67%)
Bromo_brd1_like 615..712 CDD:99944 41/96 (43%)
BR140_related 1303..1414 CDD:99900 66/114 (58%)
brpf3aXP_005169382.1 EPL1 125..654 CDD:331339 265/542 (49%)
ePHD_BRPF3 305..422 CDD:277173 78/116 (67%)
Bromodomain 607..704 CDD:321986 41/96 (43%)
BR140_related 1084..1198 CDD:99900 66/113 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3073
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 730 1.000 Inparanoid score I599
OMA 1 1.010 - - QHG47059
OrthoDB 1 1.010 - - D566217at2759
OrthoFinder 1 1.000 - - FOG0001002
OrthoInspector 1 1.000 - - otm25045
orthoMCL 1 0.900 - - OOG6_102102
Panther 1 1.100 - - O PTHR13793
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1726
SonicParanoid 1 1.000 - - X459
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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