DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and brpf1

DIOPT Version :10

Sequence 1:NP_610266.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_012815976.1 Gene:brpf1 / 100127652 XenbaseID:XB-GENE-995817 Length:1273 Species:Xenopus tropicalis


Alignment Length:1589 Identity:557/1589 - (35%)
Similarity:741/1589 - (46%) Gaps:486/1589 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLDFDAVEYCKGVKTQQSQPPFACPVRGCDRSYKTIMGLQYHLMKYDHDNPQPLTPVLTPSRKK 65
            ||:|||...:|..::.  ::||:.|||..|.:.||:..|::|||..|||||| ||.. .||.|| 
 Frog     2 MGVDFDVKTFCHNLRA--TKPPYECPVETCRKIYKSYSGIEYHLYHYDHDNP-PLQQ-QTPIRK- 61

  Fly    66 ARSRSGGHHSTPR-PHKDHPTPGGGGAEARNGCSSASAGGGSASGVSARQYANPESLVSYNEEEA 129
              |:..|.|  || .:|..||                  ....|....|:      :::|.:.:.
 Frog    62 --SKKKGRH--PRSANKQSPT------------------NSEVSQSPTRE------VMTYAQAQR 98

  Fly   130 TVTFNLDGKSVRLGIDDALPLVEDEEFAALVARGCILNADAPPLE--------EN---------- 176
            .|...|.|:..|:.|.|.|.:|.::              |.||.|        ||          
 Frog    99 LVEVELHGRVHRISIFDNLDVVSED--------------DDPPEETPENGSNKENNDTPATTPKS 149

  Fly   177 --------------------APWARVQVP--VARVAEIPDYRVSDAPPRPLAYYRFIEKSLEELD 219
                                ...|..::|  |.|..|:..   .||||||.:|||:||||.||||
 Frog   150 GKHKNKDKRKDSNHHHHHSATAGAATKLPEVVYRELELDS---PDAPPRPSSYYRYIEKSAEELD 211

  Fly   220 GEVEYDVDEEDSAWLEHMNEERQRLGLNAVGIDTMELLMDRLEKESHFQAAANGTPTGVEVDDDA 284
            .|||||:||||..||:.||:.|:..|:|.:..:..|.|||||||||:|::...|.|..: :|:||
 Frog   212 EEVEYDMDEEDYIWLDIMNDRRKNDGVNHIPQEIFEYLMDRLEKESYFESHNKGDPNSL-IDEDA 275

  Fly   285 VCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCRRCLQSPSKPVNCVLCPNAGGA 349
            |||||.||||||:|||||||||||||||:||||||||||||||||||||||:.|:|.||||.|||
 Frog   276 VCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSPSRAVDCALCPNKGGA 340

  Fly   350 FKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPPARWRLTCYVCKEKGLGACIQCHRNS 414
            |||||.|:|||||||||||||.||||||||||||||.||||||:||||:||::|.|||||||:.:
 Frog   341 FKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKAN 405

  Fly   415 CYAAFHVTCAQQAGLYMTMDTVKD-GHNDSSMHVQKFAYCHAHTPADAKLKM-----------NV 467
            ||.||||||||||||||.|:.|:: |.|.:|..|:|.|||..|||..:..|:           :.
 Frog   406 CYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVRKTAYCDIHTPPGSVCKLPALSHSEGEEEDD 470

  Fly   468 PDFED---------------TRHKMKEARKALAKKRSTAPVVLIPTIPPDRVQEIATMVTMQRKK 517
            .:.||               :|.|||:|||.||:||:.||||.:|.|||.|:.:|...:|:|||.
 Frog   471 EEEEDGKGWSSEKVKKAKAKSRIKMKKARKILAEKRAAAPVVSVPCIPPHRLSKITNRLTIQRKS 535

  Fly   518 EFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRN-------------------------- 556
            :|:.|:.:||||||..|||||||||||:    |...|||                          
 Frog   536 QFMQRLHSYWTLKRQSRNGVPLLRRLQT----HLQSQRNCDQKASSSESETTYSACLSAFGTVQE 596

  Fly   557 ---GIEGSPDT--------------GE-------------LYRQLKYWQCLRQDLERARLLCELV 591
               .|..|.||              |:             |..|||.||.||.||||||||.||:
 Frog   597 MKWRIPISDDTPGHLGTIAISNEEPGDQANKNDPTDKNWVLKEQLKSWQRLRHDLERARLLVELI 661

  Fly   592 RKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARDSMQIFREPVDTS------EVPDYTD 650
            |||||||...:::.:..:.:||.|....|.|.|:.|:.:|:..||.|||..|      |||||.:
 Frog   662 RKREKLKRETIKVQQMALEMQLTPFLILLRKTLELLQEKDTSNIFTEPVPLSEVTEIYEVPDYLE 726

  Fly   651 IVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGIRMRDQAAPLFVQV 715
            .||:|||..||:..|:..:|.:.:|.|.||:|::.||:.||.|||:||||..|:|:|.|.|..|.
 Frog   727 HVKKPMDFQTMKRNLEAFRYQNFDQFEEDFNLIVNNCIKYNAKDTIFYRAASRLREQGAALLRQA 791

  Fly   716 RKELQRDGL----------------LARS------QRYHV--DHVEAEVEQELRLLLAAPASEGI 756
            ||:.::.|:                :.|.      :|.|:  ...:..:|::|::.||.      
 Frog   792 RKQAEKIGIDFETGMHIHPVITGNEIGRHGRENDFERAHLSDSRKQLPLEEQLKVQLAR------ 850

  Fly   757 VQKLLILADKSQVLKNPTYRTKKIKQIRLEISRMRKSLQKARFAARHSSHANQSQSDDEDTLGGS 821
                   .|:....|....|.::.|.||.||:.:|:.:          .:..:|:.|     |||
 Frog   851 -------LDEVNASKQSIGRARRAKMIRKEITSIRRKM----------VYQQESRRD-----GGS 893

  Fly   822 PSKKRTRKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSP 886
                   :|.:|:|......|  ...|:|...||..|::.|::....     ..|..|..|:.. 
 Frog   894 -------ERHSSAGRGALPLH--GPSEKDGQTDSAAEESSSQETGKG-----LGPNTSSTNAHE- 943

  Fly   887 VGINRRTAILLTRKAQAALKRPSEPLTTPVKEEQHNSQSSNTQSTSGSSSSVTTAATAASSGAGT 951
              :.|||::|.::|.......|..|...|        ::.:.|.:||..||.......:.:|...
 Frog   944 --VGRRTSVLFSKKNPKTAGPPKRPGRPP--------KNRDNQLSSGQISSPIGPPQLSVTGGSQ 998

  Fly   952 LNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSSSAGTAAAASLTSTALAMNSKLSANLPV 1016
            ....:.|..||:||.:                   .|.|..:|...||             :||.
 Frog   999 RRKRVRSPRPTSSSDS-------------------DSDSEKSAEEPSL-------------DLPT 1031

  Fly  1017 KSPKRPGRYRRVPEVRHSSSMSPKKSPNPAVTVSQALPMPETLPFERIPDSFRVYR--ANNQRDV 1079
            ..              .|||.                        :::..||.|||  .|..|..
 Frog  1032 NG--------------FSSST------------------------QQVKKSFLVYRTDCNLPRSS 1058

  Fly  1080 SDSDDAPSQSSSPCSSCSDFSMSGSCSDFDSDEASEGDADGDPDRDGGRSRSEERDSTSQEGTTD 1144
            |||:.:.:.|||..                ||..|.     .|.:.|....|..||:.:.     
 Frog  1059 SDSESSTTSSSSAA----------------SDRTST-----TPSKQGRGKPSFSRDNFAD----- 1097

  Fly  1145 AMDMQHASLNNVQGNNGNMAISSSSGGSGGSSSEDDELEERPLSARQNKPMKVGTRGTPTPTTMA 1209
                                          .||||       .|..:|:...||           
 Frog  1098 ------------------------------YSSED-------TSGTENESYSVG----------- 1114

  Fly  1210 RAVALSAGR-GRGKRRSNLSESTSSTATPPPLRRAGKLRSATPNASPLVNNIKARRNTTAAGSAP 1273
                   || |.|..|..|..           |.||.|                           
 Frog  1115 -------GRVGHGLVRKGLES-----------RGAGWL--------------------------- 1134

  Fly  1274 LTNNNRSKHSEDSASSERHNNHSHGQKPALEPLQLVWAKCRGYPWYPALILDPKTPK-GFVYNGV 1337
                     |||..|             .||.|.||||||||||.|||||:|||.|: |..::||
 Frog  1135 ---------SEDEDS-------------PLEALDLVWAKCRGYPSYPALIIDPKMPREGVFHHGV 1177

  Fly  1338 PLPAPPTDVLALRKNCLDEI---VFLVLFFDVKRTWQWLPANKLDILGIDKQLDQQKLVESRKPA 1399
            |:|.||.|||.|.:....|.   ::||||||.||||||||..||..||::::||::|::|.||..
 Frog  1178 PIPVPPVDVLKLGEQMAQEAQEHLYLVLFFDNKRTWQWLPRTKLVPLGMNRELDKEKMLEGRKSN 1242

  Fly  1400 ERKAVKKAYQDALHYQSQVSDLEGQGPDP 1428
            .||:|:.||..|:.::::|     || ||
 Frog  1243 IRKSVQIAYDRAMQHRNKV-----QG-DP 1265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_610266.1 SFP1 <22..61 CDD:227516 19/38 (50%)
COG5141 203..>625 CDD:227470 270/504 (54%)
Bromo_brd1_like 615..712 CDD:99944 46/102 (45%)
MSCRAMM_ClfA <1080..1163 CDD:468110 14/82 (17%)
PWWP_BRPF 1303..1414 CDD:438964 64/114 (56%)
brpf1XP_012815976.1 SFP1 <21..53 CDD:227516 17/32 (53%)
COG5141 180..>558 CDD:227470 232/381 (61%)
ePHD_BRPF1 331..451 CDD:277171 89/119 (75%)
Bromodomain 685..788 CDD:445827 46/102 (45%)
PWWP_BRPF1 1142..1261 CDD:438984 64/118 (54%)

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