DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Br140 and mllt10

DIOPT Version :9

Sequence 1:NP_001286155.1 Gene:Br140 / 35648 FlyBaseID:FBgn0033155 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_012821091.1 Gene:mllt10 / 100036598 XenbaseID:XB-GENE-6408100 Length:1025 Species:Xenopus tropicalis


Alignment Length:1085 Identity:254/1085 - (23%)
Similarity:405/1085 - (37%) Gaps:325/1085 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 NGTPTGVEVDDD---------AVCCICLDGECQNTNVILFCD--MCNLAVHQDCYGVPYIPEGQW 325
            :|.|..|..:::         ..||:|.|......|.:::||  .||:||||.|||:..:|.|.|
 Frog     3 SGEPVVVAAEEELPTSMKEMIGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPW 67

  Fly   326 LCRRC-LQSPSKPVNCVLCPNAGGAFKQTDHGQWAHVVCALWIPEVRFANTVFLEPIDSIETIPP 389
            .||:| .|..:..|.|.|||:..||.|:||:|.||||||||:||||:|||...:||| .::::|.
 Frog    68 FCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVSTMEPI-VLQSVPH 131

  Fly   390 ARWRLTCYVCKEKG------LGACIQCHRNSCYAAFHVTCAQQAGLYMTMDTVKDGHNDSSMHVQ 448
            .|:..|||:|.|:|      .|||:.|:::.|..||||||||.|||      :.:...:.:.:||
 Frog   132 ERYNKTCYICDEQGRESKAATGACMTCNKHGCRQAFHVTCAQLAGL------LCEEEGNGADNVQ 190

  Fly   449 KFAYCHAHTPADAKLKMNVPDFEDTRHKMKEARKALAKKRSTAPVVLIPTIPPDRVQEIATMVTM 513
            ...||..|.   :|||          ||.||..:..::|:......|:|::            |:
 Frog   191 YCGYCKYHY---SKLK----------HKEKEKHRQKSRKQMEPLPALVPSL------------TV 230

  Fly   514 QRKKEFLDRIIAYWTLKRHYRNGVPLLRRLQSQGNNHGVIQRNGIEGSPDTGELYRQLKYWQCLR 578
            ..:|.:                      ...|..||:.|         |.:              
 Frog   231 TTEKTY----------------------TCSSSNNNNSV---------PSS-------------- 250

  Fly   579 QDLERARLLCELVRKREKLKVAFVRISEEVVMLQLNPLEAALNKLLDALEARDSMQIFREPVDTS 643
                        |::.|.....|...:.:.|  ..:|     ..:.:|||||           :|
 Frog   251 ------------VKRIEDTSARFTNANFQEV--STHP-----TSVKEALEAR-----------SS 285

  Fly   644 EVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYRAGIRMRDQA 708
            |:..     |:.....|::...|....              :||.......:.|.:|..    ..
 Frog   286 EIKG-----KKAASHITLQRGRKSSSG--------------RNCAGSATATSPFQQAHF----SG 327

  Fly   709 APLFVQVRKELQRDGLLARSQRYHVDHVEAEV-------EQELRLLLAAPASEGIVQKLLILADK 766
            .|..|:     ...|...:|.:..:...|.||       .|:|.....||..:..:|:..|.:..
 Frog   328 TPSSVK-----SSSGSSVQSPQEFLSFTEFEVRTESYHHSQQLTSTKDAPKGDTGLQEGTINSFS 387

  Fly   767 SQV--LKNP--TYRTKKIKQIRLEISRMRKSLQKARFAARHSSHANQSQSDDEDTLGGSPSKKRT 827
            |.:  ..||  :::||..:.:..:.  :..||..|.:....||..      ||||:   ..|||.
 Frog   388 SLIGLPTNPPLSFQTKNYESVPGDY--VNSSLTVAGYKRLQSSVL------DEDTV---KEKKRK 441

  Fly   828 RKRFNSSGVDMELGHDDDDEEEDSDEDSMGEDTVSKDLLNSTQTPPCSPIKSLNNSSSPVGINRR 892
            ..:.|..|.....|:.:             ::|:|.  |:::...|.|.:.|...|.:...|.|.
 Frog   442 GNKQNKHGPGRPKGNKN-------------QETLSH--LSASSASPTSSVASAAGSIASSVIQRS 491

  Fly   893 TAILLTRKAQAALKRPSEPLTTPVKEEQHNSQSSNTQSTSGSSSS------VTTAATAASSGAGT 951
            ..:|                      ...:.||.:..|:.|.|:|      |.|:..:|.||:.|
 Frog   492 PTLL----------------------RNGSLQSLSVGSSPGGSASLCNCNDVPTSFPSALSGSST 534

  Fly   952 LNHVLSSAPPTASSFALTQNNSSGGGALASGTGIGGSSSAGTAA--AASLTSTALAMNS------ 1008
              .|.||..|..::..|.|..||...:||       :..|.|.|  .:||..::|||:|      
 Frog   535 --PVSSSHIPQPAAAHLQQEVSSSPSSLA-------TVPANTVATQVSSLPGSSLAMSSSHTYGR 590

  Fly  1009 -----KLSANLPVKSPK-RPGRYRRVPEVRHSSSMSPKKSPNPAVTVSQALPMPETLPFERIPDS 1067
                 ..:..|||.|.. :|.:    ..|.|:.:: |.|..:|..::|..|              
 Frog   591 RLNPTSAAGTLPVPSENAQPDQ----DAVDHNRNL-PAKGASPRGSISPRL-------------- 636

  Fly  1068 FRVYRANNQRDVSDSDDAPSQSSSPCSS--CSDFSMSGSCSDFDSDEASEGDADGDPDRDGGRSR 1130
             .:|...            |...||.:|  .|.|..||     :|...|...|....::...|..
 Frog   637 -NIYGVG------------SDKISPLNSLATSRFEPSG-----NSSLESVPPAATSIEQLLERQW 683

  Fly  1131 SEERDSTSQEGTTDAMDMQHASLNNVQGNNGNMAISSSSGGSGGSSSEDDELEE--RPLSARQNK 1193
            ||.:....::||:..:.....||:.:|                   .|:..|||  :.|:|::.:
 Frog   684 SEGQQFLQEQGTSSDILGMLKSLHQLQ-------------------VENRRLEEQIKNLTAKKER 729

  Fly  1194 PMKVGTR-GTPTPTTMARAVALSAGRGRGKRRSNLSESTSSTATPPPLRRAGKLRSATPNASPLV 1257
            ...:..: ..|.||..:                  :.:||......||:......|...:.||.:
 Frog   730 LQLLNAQLSVPFPTISS------------------NPNTSPQVHTYPLQNVSNSDSLNISKSPHL 776

  Fly  1258 NNIKARRNTTAAGSAPLTNNNRSKHSEDSASSERHNNHSHGQKPA 1302
            .|.:. .|.....:..||::.:|..|..|.|:...:    ||.||
 Frog   777 GNFQL-DNALPVPNQELTSSGQSTSSSSSLSTPPPD----GQSPA 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Br140NP_001286155.1 EPL1 <192..264 CDD:287484
PHD_BRPF 283..336 CDD:277047 23/64 (36%)
ePHD_BRPF 340..456 CDD:277140 56/121 (46%)
Bromo_brd1_like 615..712 CDD:99944 16/96 (17%)
BR140_related 1303..1414 CDD:99900 254/1085 (23%)
mllt10XP_012821091.1 PHD_AF10_AF17 25..72 CDD:277049 21/46 (46%)
ePHD_AF10 79..207 CDD:277178 63/147 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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