DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or98b

DIOPT Version :10

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_524540.4 Gene:Or98b / 43375 FlyBaseID:FBgn0039582 Length:383 Species:Drosophila melanogaster


Alignment Length:406 Identity:76/406 - (18%)
Similarity:152/406 - (37%) Gaps:79/406 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVGINVRMWRHLAVLYPTPGSSWRKFAFVL------PVT-AMNLMQFVYLLRMWGDLPAFILNMF 65
            |:|:.:...:.:...||     ||....:|      |:| |..|.....:.::...|.:.::::.
  Fly    16 LLGLELLHEQDVGHRYP-----WRSICCILSVASFMPLTIAFGLQNVQNVEQLTDSLCSVLVDLL 75

  Fly    66 FFSAIFNALMRTWLVIIKRRQFEEFLGQLATLFHSILDSTDEW--GRGILRRAEREARNLAIL-- 126
                   ||.:..|.:...:.|:..:||    |:.:|.:....  ...|:.|..|..:.::.:  
  Fly    76 -------ALCKIGLFLWLYKDFKFLIGQ----FYCVLQTETHTAVAEMIVTRESRRDQFISAMYA 129

  Fly   127 ------NLSASFLDIVGALVS--------PLFREERAHPFGLALPGVSMTSSPVYEVIYLAQLPT 177
                  .|||..:..:..|:|        |.|      ||....|..:|..|. |.:.|...:..
  Fly   130 YCFITAGLSACLMSPLSMLISYQRTGELQPKF------PFPSVYPWDNMKLSN-YIISYFWNVCA 187

  Fly   178 PLLLSMMYMPFVSLFAGLAIFGKAMLQILVHRLGQIGGEEQSEEERFQRLASCIAYHTQVMRYVW 242
            .|.:::..:...:||..|:....|:.||..|::....|....|..             :.:::|:
  Fly   188 ALGVALPTVCVDTLFCSLSHNLCALFQIARHKMMHFEGRNTKETH-------------ENLKHVF 239

  Fly   243 QLNKLVANIVAVEAIIFGSIICSLLFC-LNIITSPTQVISIVMYILTMLYVLFT---------YY 297
            ||..|..|:.......|..:||..:.. |::.....|:.:.::....:.|..||         |.
  Fly   240 QLYALCLNLGHFLNEYFRPLICQFVAASLHLCVLCYQLSANILQPALLFYAAFTAAVVGQVSIYC 304

  Fly   298 NRANEICLENNRVAEAVYNVPW---YEAGTRFRKTLLIFLMQTQ--HPMEIRVGNVYPMTLAMFQ 357
            ...:.|..|.....:|:|...|   .:...:...:|.|.:|::.  .|::   |..:........
  Fly   305 FCGSSIHSECQLFGQAIYESSWPHLLQENLQLVSSLKIAMMRSSLGCPID---GYFFEANRETLI 366

  Fly   358 SLLNASYSYFTMLRGV 373
            :::..:.||.|:||.:
  Fly   367 TIVRTAISYVTLLRSL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 60/340 (18%)
Or98bNP_524540.4 7tm_6 59..372 CDD:251636 60/346 (17%)

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