DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or59c

DIOPT Version :10

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster


Alignment Length:201 Identity:45/201 - (22%)
Similarity:97/201 - (48%) Gaps:27/201 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 LLSMMY-MPFVSLFAGLAIFGKAMLQILVHRLGQIGGEEQ-SEEERFQRLASCIAYHTQVMRYVW 242
            |:|..| :.|:|||       :..|.||..|:..:..:.: ||.|.::::.:||..|    |.:.
  Fly   205 LMSDTYAIVFISLF-------RCHLAILRDRIANLRQDPKLSEMEHYEQMVACIQDH----RTII 258

  Fly   243 QLNKLVANIVAVE--------AIIFGSIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNR 299
            |.::::..|:::.        .|..|....|:||..|.|.:   :::.|.:|:.:....|.....
  Fly   259 QCSQIIRPILSITIFAQFMLVGIDLGLAAISILFFPNTIWT---IMANVSFIVAICTESFPCCML 320

  Fly   300 ANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASY 364
            ...:..::..|:.|:::..|..|...::..:|.||.:.|.|::...|:::|:::   ||.:..:.
  Fly   321 CEHLIEDSVHVSNALFHSNWITADRSYKSAVLYFLHRAQQPIQFTAGSIFPISV---QSNIAVAK 382

  Fly   365 SYFTML 370
            ..||::
  Fly   383 FAFTII 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 43/193 (22%)
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 43/196 (22%)

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